RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 BRD2P25440 801 aaKnown RBP15.04■□□□□ -0
GAPDH-203ENST00000396858 CLCN1P35523 988 aa15.04■□□□□ -0
GAPDH-203ENST00000396858 EIF4A3P38919 411 aaKnown RBP15.04■□□□□ -0
GAPDH-203ENST00000396858 HTRA4P83105 476 aaPredicted RBP15.04■□□□□ -0
GAPDH-203ENST00000396858 RAD9BQ6WBX8 426 aa15.04■□□□□ -0
GAPDH-203ENST00000396858 ZNF571Q7Z3V5 609 aaPredicted RBP15.04■□□□□ -0
GAPDH-203ENST00000396858 LIMS2Q7Z4I7 341 aa15.04■□□□□ -0
GAPDH-203ENST00000396858 FMNL3Q8IVF7 1028 aa15.04■□□□□ -0
GAPDH-203ENST00000396858 COLGALT1Q8NBJ5 622 aa15.04■□□□□ -0
GAPDH-203ENST00000396858 OR6B3Q8NGW1 331 aa15.04■□□□□ -0
GAPDH-203ENST00000396858 SUSD3Q96L08 255 aa15.04■□□□□ -0
GAPDH-203ENST00000396858 ZNF558Q96NG5 402 aa15.04■□□□□ -0
GAPDH-203ENST00000396858 DPEP3Q9H4B8 488 aa15.04■□□□□ -0
GAPDH-203ENST00000396858 NOCTQ9UK39 431 aaKnown RBP15.04■□□□□ -0
GAPDH-203ENST00000396858 ADAM28Q9UKQ2 775 aa15.04■□□□□ -0
GAPDH-203ENST00000396858 PYCARDQ9ULZ3 195 aa15.04■□□□□ -0
GAPDH-203ENST00000396858 BARX2Q9UMQ3 279 aaPredicted RBP15.04■□□□□ -0
GAPDH-203ENST00000396858 CNTN6Q9UQ52 1028 aa15.04■□□□□ -0
GAPDH-203ENST00000396858 FAN1Q9Y2M0 1017 aa15.04■□□□□ -0
GAPDH-203ENST00000396858 SF3B1O75533 1304 aaKnown RBP eCLIP15.03■□□□□ -0
GAPDH-203ENST00000396858 H0YGN5 161 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 M0QZQ0 153 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 NRDCO43847 1150 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 TLL1O43897 1013 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 TACC1O75410 805 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 CYP11B1P15538 503 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 LAG3P18627 525 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 ACAT1P24752 427 aaKnown RBP15.03■□□□□ -0
GAPDH-203ENST00000396858 TKTP29401 623 aaKnown RBP15.03■□□□□ -0
GAPDH-203ENST00000396858 GNA15P30679 374 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 SSTR3P32745 418 aaPredicted RBP15.03■□□□□ -0
GAPDH-203ENST00000396858 RAD23BP54727 409 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 PTK2Q05397 1052 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 SHHQ15465 462 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 CCDC142Q17RM4 750 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 FAM109BQ6ICB4 259 aaPredicted RBP15.03■□□□□ -0
GAPDH-203ENST00000396858 FUT10Q6P4F1 479 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 SLC4A11Q8NBS3 891 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 LNX1Q8TBB1 728 aaPredicted RBP15.03■□□□□ -0
GAPDH-203ENST00000396858 SYT11Q9BT88 431 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 COLEC11Q9BWP8 271 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 SNX25Q9H3E2 840 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 DEF6Q9H4E7 631 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 NHEJ1Q9H9Q4 299 aaPredicted RBP15.03■□□□□ -0
GAPDH-203ENST00000396858 SPTLC3Q9NUV7 552 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 SEPT11Q9NVA2 429 aaKnown RBP15.03■□□□□ -0
GAPDH-203ENST00000396858 PUF60Q9UHX1 559 aaKnown RBP15.03■□□□□ -0
GAPDH-203ENST00000396858 PCDHB8Q9UN66 801 aa15.03■□□□□ -0
GAPDH-203ENST00000396858 A8MXQ7 604 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 THAP12O43422 761 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 TADA2AO75478 443 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 CCDC172P0C7W6 258 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 CD19P15391 556 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 KIF11P52732 1056 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 RABGGTBP53611 331 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 PSMC1P62191 440 aaKnown RBP15.02■□□□□ -0
GAPDH-203ENST00000396858 CDK17Q00537 523 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 KCNT2Q6UVM3 1135 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 TOGARAM2Q6ZUX3 1019 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 TMTC1Q8IUR5 882 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 SLC39A11Q8N1S5 342 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 PHOSPHO2Q8TCD6 241 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 SP7Q8TDD2 431 aaPredicted RBP15.02■□□□□ -0
GAPDH-203ENST00000396858 B3GALT6Q96L58 329 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 DESI2Q9BSY9 194 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 NT5C1AQ9BXI3 368 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 GPR62Q9BZJ7 368 aa15.02■□□□□ -0
GAPDH-203ENST00000396858 UBE2OQ9C0C9 1292 aaKnown RBP15.02■□□□□ -0
GAPDH-203ENST00000396858 SSU72P8A0A1W2PR75 194 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 GRXCR1A8MXD5 290 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 ARHGAP6O43182 974 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 ALDH2P05091 517 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 CYP11A1P05108 521 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 MMEP08473 750 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 LINC00271P0C7V0 271 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 PAX3P23760 479 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 LMO2P25791 158 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 ALDH7A1P49419 539 aaKnown RBP15.01□□□□□ -0.01
GAPDH-203ENST00000396858 DPH6Q7L8W6 267 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 ACOT1Q86TX2 421 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 UNC93AQ86WB7 457 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 METTL23Q86XA0 190 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 PALB2Q86YC2 1186 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 GLYCTKQ8IVS8 523 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 TMEM86AQ8N2M4 240 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 FIBCD1Q8N539 461 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 TTC39CQ8N584 583 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 ACRBPQ8NEB7 543 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 TFAP2BQ92481 460 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 DDX1Q92499 740 aaKnown RBP15.01□□□□□ -0.01
GAPDH-203ENST00000396858 TMEM176AQ96HP8 235 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 CCDC42Q96M95 316 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 RAD9AQ99638 391 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 LPIN3Q9BQK8 851 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 RTP3Q9BQQ7 232 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 ZSWIM1Q9BR11 485 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.01□□□□□ -0.01
GAPDH-203ENST00000396858 VN1R3Q9BXE9 311 aa15.01□□□□□ -0.01
GAPDH-203ENST00000396858 FAM124BQ9H5Z6 455 aaPredicted RBP15.01□□□□□ -0.01
GAPDH-203ENST00000396858 FAM49BQ9NUQ9 324 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms