RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 TUBB4AP04350 444 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 SETSIPP0DME0 302 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 FGFR1P11362 822 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 CLCNKBP51801 687 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 HGSNATQ68CP4 663 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 ARHGAP17Q68EM7 881 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.42□□□□□ -0.9
CCR9-203ENST00000395963 TMEM139Q8IV31 216 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 CLP1Q92989 425 aaKnown RBP9.42□□□□□ -0.9
CCR9-203ENST00000395963 ZNF558Q96NG5 402 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 SYT11Q9BT88 431 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 LCMT1Q9UIC8 334 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 ADAM28Q9UKQ2 775 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 LZTS1Q9Y250 596 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 INPP5FQ9Y2H2 1132 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 FAN1Q9Y2M0 1017 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 PCDHB4Q9Y5E5 795 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 SNX9Q9Y5X1 595 aa9.42□□□□□ -0.9
CCR9-203ENST00000395963 H7C4K7 107 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 FOXN3O00409 490 aaPredicted RBP9.41□□□□□ -0.9
CCR9-203ENST00000395963 ADKP55263 362 aaKnown RBP9.41□□□□□ -0.9
CCR9-203ENST00000395963 SNX16P57768 344 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 CCZ1BP86790 482 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 CCZ1P86791 482 aaPredicted RBP9.41□□□□□ -0.9
CCR9-203ENST00000395963 CDR2Q01850 454 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 UBE3AQ05086 875 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 TEX35Q5T0J7 233 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 WDR59Q6PJI9 974 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 DSTYKQ6XUX3 929 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 C16orf59Q7L2K0 433 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 RNF168Q8IYW5 571 aaPredicted RBP9.41□□□□□ -0.9
CCR9-203ENST00000395963 ADGRF2Q8IZF7 708 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 THEM5Q8N1Q8 247 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 RBBP8NLQ8NC74 664 aaPredicted RBP9.41□□□□□ -0.9
CCR9-203ENST00000395963 MSANTD4Q8NCY6 345 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 C2orf15Q8WU43 125 aaKnown RBP9.41□□□□□ -0.9
CCR9-203ENST00000395963 CPLX3Q8WVH0 158 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 TRIM11Q96F44 468 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 TMEM176AQ96HP8 235 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 SENP8Q96LD8 212 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 CCDC42Q96M95 316 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 ACBD6Q9BR61 282 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.41□□□□□ -0.9
CCR9-203ENST00000395963 PI4K2AQ9BTU6 479 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 LHX5Q9H2C1 402 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 SNX25Q9H3E2 840 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 CWH43Q9H720 699 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 ST7Q9NRC1 585 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 FEZ2Q9UHY8 353 aaPredicted RBP9.41□□□□□ -0.9
CCR9-203ENST00000395963 CDH9Q9ULB4 789 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 CEP83Q9Y592 693 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 TRIP11Q15643 1979 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 OR6C75A6NL08 312 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 CYB561D2O14569 222 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 B3GAT3O94766 335 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 OAZ2O95190 189 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 RB1P06400 928 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 GALTP07902 379 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 CDH5P33151 784 aaPredicted RBP9.41□□□□□ -0.9
CCR9-203ENST00000395963 ALDH7A1P49419 539 aaKnown RBP9.41□□□□□ -0.9
CCR9-203ENST00000395963 PLCB3Q01970 1234 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 SLC18A3Q16572 532 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 ARHGAP44Q17R89 818 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 HERC6Q8IVU3 1022 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 EPS8L1Q8TE68 723 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 VCPIP1Q96JH7 1222 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 YME1L1Q96TA2 773 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 HERC2P3Q9BVR0 1158 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 DEF6Q9H4E7 631 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 HSFX1Q9UBD0 423 aa9.41□□□□□ -0.9
CCR9-203ENST00000395963 NXF1Q9UBU9 619 aaKnown RBP9.41□□□□□ -0.9
CCR9-203ENST00000395963 NRP1O14786 923 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 ZSCAN12O43309 604 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 DDHD2O94830 711 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 SKILP12757 684 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 CYP11B1P15538 503 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 FGFR3P22607 806 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 LRMPQ12912 555 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 BTG3Q14201 252 aaPredicted RBP9.4□□□□□ -0.9
CCR9-203ENST00000395963 SOWAHAQ2M3V2 549 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 ASTE1Q2TB18 679 aaPredicted RBP9.4□□□□□ -0.9
CCR9-203ENST00000395963 TDRD12Q587J7 1177 aaKnown RBP9.4□□□□□ -0.9
CCR9-203ENST00000395963 SPOPLQ6IQ16 392 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 FIBCD1Q8N539 461 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 MMS19Q96T76 1030 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 AGPAT1Q99943 283 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 TSGA10Q9BZW7 698 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 NHEJ1Q9H9Q4 299 aaPredicted RBP9.4□□□□□ -0.9
CCR9-203ENST00000395963 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCR9-203ENST00000395963 CWC15Q9P013 229 aaKnown RBP9.4□□□□□ -0.9
CCR9-203ENST00000395963 ARHGAP20Q9P2F6 1191 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 NOCTQ9UK39 431 aaKnown RBP9.4□□□□□ -0.9
CCR9-203ENST00000395963 STXBP5LQ9Y2K9 1186 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 PCDHB12Q9Y5F1 795 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 V9GYY5 206 aaPredicted RBP9.4□□□□□ -0.9
CCR9-203ENST00000395963 CEP350Q5VT06 3117 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 KIAA0100Q14667 2235 aaKnown RBP9.4□□□□□ -0.9
CCR9-203ENST00000395963 PTPRSQ13332 1948 aa9.4□□□□□ -0.9
CCR9-203ENST00000395963 A0A1W2PPC1 479 aa9.4□□□□□ -0.91
CCR9-203ENST00000395963 CASTOR2A6NHX0 329 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms