RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ANKS1AQ92625 1134 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 DAGLAQ9Y4D2 1042 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 NBPF26B4DH59 902 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 PJA2O43164 708 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 GPD1P21695 349 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 GARTP22102 1010 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 GTF2H1P32780 548 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 NAMPTP43490 491 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 PRKCQQ04759 706 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 PRR5LQ6MZQ0 368 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 MICALL2Q8IY33 904 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 NBPF15Q8N660 670 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 GPRC5AQ8NFJ5 357 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 ERGIC2Q96RQ1 377 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 TMEM117Q9H0C3 514 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 BATF3Q9NR55 127 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 KIAA1257Q9ULG3 409 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 MYH6P13533 1939 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 NPHP3-ACAD11A0A0J9YXS1 232 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 F5H423 210 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 NR3C2P08235 984 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 SNRPAP09012 282 aaKnown RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 AKT1P31749 480 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 RGS2P41220 211 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 ALDH7A1P49419 539 aaKnown RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 PCYT1AP49585 367 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 TIGD7Q6NT04 549 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 DCP1BQ8IZD4 617 aaKnown RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 PABPC5Q96DU9 382 aaKnown RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 TMEM106CQ9BVX2 250 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 SFMBT1Q9UHJ3 866 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 TBX20Q9UMR3 447 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 PSMD14O00487 310 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 ZNF185O15231 689 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 ASMTLO95671 621 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 PDGFRBP09619 1106 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 HOXC6P09630 235 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 ODC1P11926 461 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 ZNF157P51786 506 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 RAD23BP54727 409 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 COBLL1Q53SF7 1204 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 CATSPER3Q86XQ3 398 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 CCNJLQ8IV13 435 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 AGR3Q8TD06 166 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 SERPINB12Q96P63 405 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 POLD4Q9HCU8 107 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 PRDM5Q9NQX1 630 aaPredicted RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 MYH11P35749 1972 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 POLRMTO00411 1230 aaKnown RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 SLC26A2P50443 739 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 KDSRQ06136 332 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 AGAP9Q5VTM2 703 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 ANKMY2Q8IV38 441 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 PPIL6Q8IXY8 311 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 SEPT8Q92599 483 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 EME1Q96AY2 570 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 KCNH7Q9NS40 1196 aa5.7□□□□□ -1.5
VPS13C-204ENST00000395898 AAR2Q9Y312 384 aaKnown RBP5.7□□□□□ -1.5
VPS13C-204ENST00000395898 MYMKA6NI61 221 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 EVPLLA8MZ36 301 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 OR1G1P47890 313 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 CUL3Q13618 768 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 POLD3Q15054 466 aaPredicted RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 TDRD10Q5VZ19 366 aaKnown RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 CDC42EP5Q6NZY7 148 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 GPRASP2Q96D09 838 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ZNF668Q96K58 619 aaPredicted RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 PRPF18Q99633 342 aaKnown RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 NIF3L1Q9GZT8 377 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 RIC8BQ9NVN3 520 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 DOLKQ9UPQ8 538 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 PTPRUQ92729 1446 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 RASSF10A6NK89 507 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 FAM107AO95990 144 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 MYBP10242 640 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 GNL1P36915 607 aaPredicted RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 KLC1Q07866 573 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 AGGF1Q8N302 714 aaeCLIP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 AGBL3Q8NEM8 1001 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 NUDT12Q9BQG2 462 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 TUBE1Q9UJT0 475 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 GOLGA8RI6L899 631 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 GPR182O15218 404 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ENO1P06733 434 aaKnown RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 TMEM253P0C7T8 217 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 PLA2G4AP47712 749 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 DAB2IPQ5VWQ8 1189 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ACAD10Q6JQN1 1059 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 MOXD1Q6UVY6 613 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 DAGLBQ8NCG7 672 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 ELMO2Q96JJ3 720 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 GPR63Q9BZJ6 419 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 CARD9Q9H257 536 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 H2AFY2Q9P0M6 372 aaPredicted RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 KIDINS220Q9ULH0 1771 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 RIMS1Q86UR5 1692 aaKnown RBP5.69□□□□□ -1.5
VPS13C-204ENST00000395898 CNTNAP5Q8WYK1 1306 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 EIF3HO15372 352 aaKnown RBP eCLIP5.69□□□□□ -1.59e-7■■■■□ 25.2
VPS13C-204ENST00000395898 S100A5P33763 92 aa5.69□□□□□ -1.5
VPS13C-204ENST00000395898 TAF6P49848 677 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms