RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 NTRK3Q16288 839 aa9.36□□□□□ -0.91
MSH5-205ENST00000395853 IGSF11Q5DX21 431 aa9.36□□□□□ -0.91
MSH5-205ENST00000395853 TMEM63BQ5T3F8 832 aa9.36□□□□□ -0.91
MSH5-205ENST00000395853 FBXO46Q6PJ61 603 aaPredicted RBP9.36□□□□□ -0.91
MSH5-205ENST00000395853 PPP1R21Q6ZMI0 780 aa9.36□□□□□ -0.91
MSH5-205ENST00000395853 DCDC5Q6ZRR9 648 aa9.36□□□□□ -0.91
MSH5-205ENST00000395853 NELFCDQ8IXH7 590 aa9.36□□□□□ -0.91
MSH5-205ENST00000395853 CPSF7Q8N684 471 aaKnown RBP9.36□□□□□ -0.91
MSH5-205ENST00000395853 KIAA1958Q8N8K9 716 aa9.36□□□□□ -0.91
MSH5-205ENST00000395853 EIF1ADQ8N9N8 165 aaKnown RBP9.36□□□□□ -0.91
MSH5-205ENST00000395853 COQ7Q99807 217 aa9.36□□□□□ -0.91
MSH5-205ENST00000395853 RIOK1Q9BRS2 568 aaKnown RBP9.36□□□□□ -0.91
MSH5-205ENST00000395853 ZC3H12CQ9C0D7 883 aaKnown RBP9.36□□□□□ -0.91
MSH5-205ENST00000395853 MTMR12Q9C0I1 747 aa9.36□□□□□ -0.91
MSH5-205ENST00000395853 SIAEQ9HAT2 523 aa9.36□□□□□ -0.91
MSH5-205ENST00000395853 SCPEP1Q9HB40 452 aa9.36□□□□□ -0.91
MSH5-205ENST00000395853 KLHL14Q9P2G3 628 aa9.36□□□□□ -0.91
MSH5-205ENST00000395853 HDAC9Q9UKV0 1011 aa9.36□□□□□ -0.91
MSH5-205ENST00000395853 SOBPA7XYQ1 873 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 CENPBD1B2RD01 187 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 NCK2O43639 380 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 RANBP6O60518 1105 aaKnown RBP9.35□□□□□ -0.91
MSH5-205ENST00000395853 EGFRP00533 1210 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 FUCA1P04066 466 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 M6PRP20645 277 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 MARK3P27448 753 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 EPHB2P29323 1055 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 PPP1R2P41236 205 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 MMP13P45452 471 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 RPL5P46777 297 aaKnown RBP9.35□□□□□ -0.91
MSH5-205ENST00000395853 PRKCEQ02156 737 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 PSMD6Q15008 389 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 PPP1R2P3Q6NXS1 205 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 SGMS1Q86VZ5 419 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 IFNL1Q8IU54 200 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 NUP88Q99567 741 aaPredicted RBP9.35□□□□□ -0.91
MSH5-205ENST00000395853 ACAD8Q9UKU7 415 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 SPEF1Q9Y4P9 236 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 CLIC4Q9Y696 253 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 TSPY2A6NKD2 308 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 M0QX08 132 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 TSPY3P0CV98 308 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 TSPY8P0CW00 308 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 CD9P21926 228 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 PCSK6P29122 969 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 STAT3P40763 770 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 CLK3P49761 638 aaKnown RBP9.35□□□□□ -0.91
MSH5-205ENST00000395853 STAT2P52630 851 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 HERVK_113P62684 666 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 TSPY1Q01534 308 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 EVX2Q03828 476 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 CDK18Q07002 472 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 CCDC58Q4VC31 144 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 SGO2Q562F6 1265 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 RSBN1LQ6PCB5 846 aaPredicted RBP9.35□□□□□ -0.91
MSH5-205ENST00000395853 IZUMO2Q6UXV1 221 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 DLK2Q6UY11 383 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 C4orf50Q6ZRC1 276 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 VSIG1Q86XK7 387 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 RELL1Q8IUW5 271 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 UBLCP1Q8WVY7 318 aaPredicted RBP9.35□□□□□ -0.91
MSH5-205ENST00000395853 MTMR9Q96QG7 549 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 CHP1Q99653 195 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 ALG1Q9BT22 464 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 ZBED2Q9BTP6 218 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 RNF38Q9H0F5 515 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 MARCH7Q9H992 704 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 NEK6Q9HC98 313 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 CYLDQ9NQC7 956 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 THEGQ9P2T0 379 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 ADD3Q9UEY8 706 aaKnown RBP9.35□□□□□ -0.91
MSH5-205ENST00000395853 PRKAG3Q9UGI9 489 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 HYOU1Q9Y4L1 999 aa9.35□□□□□ -0.91
MSH5-205ENST00000395853 GOLGA8MH3BSY2 632 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 RIMBP2O15034 1052 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 ZNF862O60290 1169 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 CCNT1O60563 726 aaKnown RBP9.34□□□□□ -0.91
MSH5-205ENST00000395853 ALAS1P13196 640 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 HIBADHP31937 336 aaKnown RBP9.34□□□□□ -0.91
MSH5-205ENST00000395853 PPP2R2BQ00005 443 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 TRIM14Q14142 442 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 RNF43Q68DV7 783 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 SLC30A10Q6XR72 485 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 TRMT44Q8IYL2 757 aaKnown RBP9.34□□□□□ -0.91
MSH5-205ENST00000395853 ENAHQ8N8S7 591 aaPredicted RBP9.34□□□□□ -0.91
MSH5-205ENST00000395853 ATP6V0D2Q8N8Y2 350 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 PIP4K2CQ8TBX8 421 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 STMN2Q93045 179 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 FGFR1OP2Q9NVK5 253 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 VPS51Q9UID3 782 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 TFR2Q9UP52 801 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 SLC12A7Q9Y666 1083 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 ALOX15BO15296 676 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 AQP9O43315 295 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 RNASEH2AO75792 299 aaKnown RBP9.34□□□□□ -0.91
MSH5-205ENST00000395853 KRT36O76013 467 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 PGM3O95394 542 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 TFPTP0C1Z6 253 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 CBX5P45973 191 aa9.34□□□□□ -0.91
MSH5-205ENST00000395853 PHKA2P46019 1235 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms