RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 SPATA18Q8TC71 538 aa17.38■□□□□ 0.37
SNX9-201ENST00000392185 SKA2Q8WVK7 121 aaPredicted RBP17.38■□□□□ 0.37
SNX9-201ENST00000392185 ZSWIM1Q9BR11 485 aa17.38■□□□□ 0.37
SNX9-201ENST00000392185 RAB6BQ9NRW1 208 aa17.38■□□□□ 0.37
SNX9-201ENST00000392185 ABI2Q9NYB9 513 aaPredicted RBP17.38■□□□□ 0.37
SNX9-201ENST00000392185 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.38■□□□□ 0.371e-8■■□□□ 12.4
SNX9-201ENST00000392185 CCDC78A2IDD5 438 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 C2CD2LO14523 706 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 APOL1O14791 398 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 SESN2P58004 480 aaPredicted RBP17.37■□□□□ 0.37
SNX9-201ENST00000392185 IQSEC1Q6DN90 963 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 FAM47EQ6ZV65 393 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 NOP9Q86U38 636 aaKnown RBP17.37■□□□□ 0.37
SNX9-201ENST00000392185 SLC13A5Q86YT5 568 aaPredicted RBP17.37■□□□□ 0.37
SNX9-201ENST00000392185 SLC7A14Q8TBB6 771 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 H3BRJ5 948 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 POMCP01189 267 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 ACAT1P24752 427 aaKnown RBP17.37■□□□□ 0.37
SNX9-201ENST00000392185 NUMBP49757 651 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 DEUP1Q05D60 604 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 THOC5Q13769 683 aaKnown RBP17.37■□□□□ 0.37
SNX9-201ENST00000392185 MEA1Q16626 185 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 EEF1DP3Q658K8 133 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 DEPDC1BQ8WUY9 529 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 XPNPEP3Q9NQH7 507 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 B4GALT5O43286 388 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 ZNF862O60290 1169 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 GPD1P21695 349 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 PSMD6Q15008 389 aa17.37■□□□□ 0.37
SNX9-201ENST00000392185 SEPT5Q99719 369 aaPredicted RBP17.37■□□□□ 0.37
SNX9-201ENST00000392185 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.37■□□□□ 0.37
SNX9-201ENST00000392185 CYB561D2O14569 222 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 TNFSF9P41273 254 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 PSEN2P49810 448 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 TPI1P60174 286 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 BYSLQ13895 437 aaKnown RBP17.36■□□□□ 0.37
SNX9-201ENST00000392185 MGAT5BQ3V5L5 792 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 GPATCH2LQ9NWQ4 482 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 NKRFO15226 690 aaKnown RBP eCLIP17.36■□□□□ 0.373e-18■■□□□ 13.4
SNX9-201ENST00000392185 GSTA1P08263 222 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 GSTA2P09210 222 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 FAM200BP0CF97 657 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 LRRC14Q15048 493 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 ARHGEF26Q96DR7 871 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 TAS2R14Q9NYV8 317 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 BAIAP2L1Q9UHR4 511 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 CAPN7Q9Y6W3 813 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 RCCD1A6NED2 376 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 FARP2O94887 1054 aaPredicted RBP17.36■□□□□ 0.37
SNX9-201ENST00000392185 NCAM1P13591 858 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 TTC31Q49AM3 519 aaPredicted RBP17.36■□□□□ 0.37
SNX9-201ENST00000392185 PAPD7Q5XG87 772 aaKnown RBP17.36■□□□□ 0.37
SNX9-201ENST00000392185 TTC17Q96AE7 1141 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 MED15Q96RN5 788 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 LCMT1Q9UIC8 334 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 TLK1Q9UKI8 766 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 ABHD15Q6UXT9 468 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 ABRAQ8N0Z2 381 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 OR5B17Q8NGF7 314 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 USP33Q8TEY7 942 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 TLR10Q9BXR5 811 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 RASSF4Q9H2L5 321 aa17.36■□□□□ 0.37
SNX9-201ENST00000392185 DFFAO00273 331 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 GPR182O15218 404 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 AP1G2O75843 785 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 THP07101 528 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 BRAFP15056 766 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 XPAP23025 273 aaPredicted RBP17.35■□□□□ 0.37
SNX9-201ENST00000392185 JADE1Q6IE81 842 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 RGMBQ6NW40 437 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 RBM15Q96T37 977 aaKnown RBP eCLIP17.35■□□□□ 0.371e-8■■□□□ 11.5
SNX9-201ENST00000392185 ERP44Q9BS26 406 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 PLEKHA5Q9HAU0 1116 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 STARD7Q9NQZ5 370 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 APOEP02649 317 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 VDRP11473 427 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 NDST1P52848 882 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 KYNUQ16719 465 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 FBXO47Q5MNV8 452 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 CCDC197Q8NCU1 140 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 FSD1LQ9BXM9 530 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 CASZ1Q86V15 1759 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 NFASCO94856 1347 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 ZSCAN5CA6NGD5 496 aaPredicted RBP17.35■□□□□ 0.37
SNX9-201ENST00000392185 ATP9BO43861 1147 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 SUN1O94901 812 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 TERF2Q15554 542 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 BAP1Q92560 729 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 UPF1Q92900 1129 aaKnown RBP eCLIP17.35■□□□□ 0.37
SNX9-201ENST00000392185 TMEM176AQ96HP8 235 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 NMRK2Q9NPI5 230 aa17.35■□□□□ 0.37
SNX9-201ENST00000392185 IPO11Q9UI26 975 aaKnown RBP17.35■□□□□ 0.37
SNX9-201ENST00000392185 M0R2N6 131 aa17.34■□□□□ 0.37
SNX9-201ENST00000392185 KCNA2P16389 499 aa17.34■□□□□ 0.37
SNX9-201ENST00000392185 CAV1Q03135 178 aa17.34■□□□□ 0.37
SNX9-201ENST00000392185 HIF1AQ16665 826 aa17.34■□□□□ 0.37
SNX9-201ENST00000392185 MMGT1Q8N4V1 131 aa17.34■□□□□ 0.37
SNX9-201ENST00000392185 ANKRD7Q92527 254 aa17.34■□□□□ 0.37
SNX9-201ENST00000392185 FIS1Q9Y3D6 152 aa17.34■□□□□ 0.37
SNX9-201ENST00000392185 KRT37O76014 449 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms