RNA–Protein interactions for RNA: ENST00000392129.10

TMCO1-202, Transcript of transmembrane and coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO1, Length 1,946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-202ENST00000392129 MED7O43513 233 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 GHRP10912 638 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 ATF7P17544 494 aaPredicted RBP13.03□□□□□ -0.32
TMCO1-202ENST00000392129 MMP8P22894 467 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 CD52P31358 61 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 CDH5P33151 784 aaPredicted RBP13.03□□□□□ -0.32
TMCO1-202ENST00000392129 C2CD6Q53TS8 623 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 WDTC1Q8N5D0 677 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 STARD7Q9NQZ5 370 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 EHD2Q9NZN4 543 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 SNX9Q9Y5X1 595 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 RALGAPA2Q2PPJ7 1873 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 DDX3YO15523 660 aaKnown RBP13.03□□□□□ -0.32
TMCO1-202ENST00000392129 CAND2O75155 1236 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 ITGA4P13612 1032 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 COMTP21964 271 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 NDST1P52848 882 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 SOX4Q06945 474 aaPredicted RBP13.03□□□□□ -0.32
TMCO1-202ENST00000392129 ORC1Q13415 861 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 LPIN1Q14693 890 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 MMS22LQ6ZRQ5 1243 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 PHLDB2Q86SQ0 1253 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 HACE1Q8IYU2 909 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 C1orf131Q8NDD1 294 aaKnown RBP13.03□□□□□ -0.32
TMCO1-202ENST00000392129 SH3TC2Q8TF17 1288 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 BTBD6Q96KE9 485 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 PPP1R10Q96QC0 940 aaKnown RBP13.03□□□□□ -0.32
TMCO1-202ENST00000392129 SELENOOQ9BVL4 669 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.03□□□□□ -0.32
TMCO1-202ENST00000392129 TRPV6Q9H1D0 765 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 LHX5Q9H2C1 402 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 ANKZF1Q9H8Y5 726 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 CEP83Q9Y592 693 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 SCN1AP35498 2009 aa13.03□□□□□ -0.32
TMCO1-202ENST00000392129 MEIS3P2A8K0S8 358 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 TMEM110-MUSTN1A8MSY1 372 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 PTGESO14684 152 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 VDRP11473 427 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 PNPLA4P41247 253 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 PAK2Q13177 524 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 ZNF618Q5T7W0 954 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 PLEKHA7Q6IQ23 1121 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 LLGL2Q6P1M3 1020 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 DENND1BQ6P3S1 775 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 MRPL10Q7Z7H8 261 aaKnown RBP13.02□□□□□ -0.32
TMCO1-202ENST00000392129 HEXIM2Q96MH2 286 aaKnown RBP13.02□□□□□ -0.32
TMCO1-202ENST00000392129 ZFP42Q96MM3 310 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 TRAIPQ9BWF2 469 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 NT5C1AQ9BXI3 368 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 PARD6BQ9BYG5 372 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 GOLGA2P5Q9HBQ8 144 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 ANAPC7Q9UJX3 599 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 SQORQ9Y6N5 450 aa13.02□□□□□ -0.32
TMCO1-202ENST00000392129 A0A0U1RQG5 324 aaPredicted RBP13.01□□□□□ -0.33
TMCO1-202ENST00000392129 MIF4GDA9UHW6 222 aaKnown RBP13.01□□□□□ -0.33
TMCO1-202ENST00000392129 CEP104O60308 925 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 MGEA5O60502 916 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 CALB1P05937 261 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 H2AFXP16104 143 aaPredicted RBP13.01□□□□□ -0.33
TMCO1-202ENST00000392129 LRPAP1P30533 357 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 C2orf54Q08AI8 447 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 MAMLD1Q13495 774 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 DSC3Q14574 896 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 CNGA2Q16280 664 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 SOWAHAQ2M3V2 549 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 FBXO38Q6PIJ6 1188 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 MMGT1Q8N4V1 131 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 USP38Q8NB14 1042 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 MSANTD4Q8NCY6 345 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 GSTCDQ8NEC7 633 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 ACTRT1Q8TDG2 376 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 MRPL45Q9BRJ2 306 aaKnown RBP13.01□□□□□ -0.33
TMCO1-202ENST00000392129 MRPL47Q9HD33 250 aaKnown RBP13.01□□□□□ -0.33
TMCO1-202ENST00000392129 GDAP2Q9NXN4 497 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 KIAA1257Q9ULG3 409 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 PHF24Q9UPV7 400 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 GIT1Q9Y2X7 761 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 SCINQ9Y6U3 715 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 KPNA7A9QM74 516 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 MYO1FO00160 1098 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 ARVCFO00192 962 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 SPTLC1O15269 473 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 ZNF623O75123 536 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 RHOXF2BP0C7M4 288 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 CKBP12277 381 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 MLH1P40692 756 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 TAF6P49848 677 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 RNASE9P60153 205 aaKnown RBP13.01□□□□□ -0.33
TMCO1-202ENST00000392129 AGMOQ6ZNB7 445 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 ERICH1Q86X53 443 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 RASGEF1CQ8N431 466 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 CD101Q93033 1021 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 LPPQ93052 612 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 ZNF560Q96MR9 790 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 GAD1Q99259 594 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 RHOXF2Q9BQY4 288 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 TRIM7Q9C029 511 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 WNT8AQ9H1J5 351 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 CARD9Q9H257 536 aa13.01□□□□□ -0.33
TMCO1-202ENST00000392129 SLC38A7Q9NVC3 462 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms