RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 PIK3CGP48736 1102 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 NDUFV1P49821 464 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 TOB1P50616 345 aaPredicted RBP4.41□□□□□ -1.7
TRAV40-201ENST00000390467 TUBB3Q13509 450 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 HABP2Q14520 560 aaPredicted RBP4.41□□□□□ -1.7
TRAV40-201ENST00000390467 KIF22Q14807 665 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 TAF2Q6P1X5 1199 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 HEATR3Q7Z4Q2 680 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 MIER2Q8N344 545 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 SH2D3CQ8N5H7 860 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 AOPEPQ8N6M6 819 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 C3orf20Q8ND61 904 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 RGMAQ96B86 450 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 TINAGL1Q9GZM7 467 aaPredicted RBP4.41□□□□□ -1.7
TRAV40-201ENST00000390467 MAN1C1Q9NR34 630 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 CFAP97Q9P2B7 532 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 ABCF2Q9UG63 623 aa4.41□□□□□ -1.7
TRAV40-201ENST00000390467 VPS4BO75351 444 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 PROP1O75360 226 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 KIF20AO95235 890 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 RPLP2P05387 115 aaKnown RBP4.4□□□□□ -1.71
TRAV40-201ENST00000390467 GNAI3P08754 354 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 RARBP10826 455 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 PDCP20941 246 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 SMARCA1P28370 1054 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 RECQLP46063 649 aaPredicted RBP4.4□□□□□ -1.71
TRAV40-201ENST00000390467 MAP2K6P52564 334 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 GNAI1P63096 354 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 ITIH3Q06033 890 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 BRDTQ58F21 947 aaPredicted RBP4.4□□□□□ -1.71
TRAV40-201ENST00000390467 PPP1R32Q7Z5V6 425 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 GRASPQ7Z6J2 395 aaPredicted RBP4.4□□□□□ -1.71
TRAV40-201ENST00000390467 PPP1R3BQ86XI6 285 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 SRRM1Q8IYB3 904 aaKnown RBP4.4□□□□□ -1.71
TRAV40-201ENST00000390467 PRR18Q8N4B5 295 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 RFKQ969G6 155 aa4.4□□□□□ -1.71
TRAV40-201ENST00000390467 F5H697 171 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 INO80B-WBP1J3KQ70 363 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 URI1O94763 535 aaPredicted RBP4.39□□□□□ -1.71
TRAV40-201ENST00000390467 CHEK2O96017 543 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 AHSGP02765 367 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 FTLP02792 175 aaPredicted RBP4.39□□□□□ -1.71
TRAV40-201ENST00000390467 PDHA1P08559 390 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 FTH1P19P0C7X4 201 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 GPD1P21695 349 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 CCND1P24385 295 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 HK3P52790 923 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 NXPH1P58417 271 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 TCF15Q12870 199 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 BOP1Q14137 746 aaKnown RBP4.39□□□□□ -1.71
TRAV40-201ENST00000390467 TMEM240Q5SV17 173 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 RBM20Q5T481 1227 aaKnown RBP4.39□□□□□ -1.71
TRAV40-201ENST00000390467 VPS53Q5VIR6 699 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 LRCH2Q5VUJ6 765 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 RASAL3Q86YV0 1011 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 DPF1Q92782 380 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 TNPO1Q92973 898 aaKnown RBP4.39□□□□□ -1.71
TRAV40-201ENST00000390467 PBKQ96KB5 322 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 CNPPD1Q9BV87 410 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 ACTRT3Q9BYD9 372 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 GTPBP4Q9BZE4 634 aaKnown RBP4.39□□□□□ -1.71
TRAV40-201ENST00000390467 INO80BQ9C086 356 aaPredicted RBP4.39□□□□□ -1.71
TRAV40-201ENST00000390467 MRPL46Q9H2W6 279 aaKnown RBP4.39□□□□□ -1.71
TRAV40-201ENST00000390467 KLC4Q9NSK0 619 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 GNL3LQ9NVN8 582 aaKnown RBP4.39□□□□□ -1.71
TRAV40-201ENST00000390467 DKK3Q9UBP4 350 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 POLHQ9Y253 713 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 SPATA31A3Q5VYP0 1347 aa4.39□□□□□ -1.71
TRAV40-201ENST00000390467 COL3A1P02461 1466 aaPredicted RBP4.38□□□□□ -1.71
TRAV40-201ENST00000390467 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 MANSC4A6NHS7 340 aaPredicted RBP4.38□□□□□ -1.71
TRAV40-201ENST00000390467 M0QYG6 137 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 ORC4O43929 436 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 SNUPNO95149 360 aaKnown RBP4.38□□□□□ -1.71
TRAV40-201ENST00000390467 USP45Q70EL2 814 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 FAM109AQ8N4B1 249 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 CPA6Q8N4T0 437 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 CAMKK1Q8N5S9 505 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 FKBP10Q96AY3 582 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 GPATCH3Q96I76 525 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 OSBPL9Q96SU4 736 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 TPSD1Q9BZJ3 242 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 AMBRA1Q9C0C7 1298 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 WDCPQ9H6R7 721 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 SERHLQ9NQF3 203 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 FEZ2Q9UHY8 353 aaPredicted RBP4.38□□□□□ -1.71
TRAV40-201ENST00000390467 LUC7L2Q9Y383 392 aaKnown RBP4.38□□□□□ -1.71
TRAV40-201ENST00000390467 NR2E3Q9Y5X4 410 aa4.38□□□□□ -1.71
TRAV40-201ENST00000390467 SETD1BQ9UPS6 1966 aaKnown RBP4.38□□□□□ -1.71
TRAV40-201ENST00000390467 SLC16A6O15403 523 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 DTNBO60941 627 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 IL33O95760 270 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 POU2F2P09086 479 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 NR2F6P10588 404 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 TYRP14679 529 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 DRD4P21917 467 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 EXOSC9Q06265 439 aaKnown RBP4.37□□□□□ -1.71
TRAV40-201ENST00000390467 CELF5Q8N6W0 485 aaKnown RBP4.37□□□□□ -1.71
TRAV40-201ENST00000390467 DDB2Q92466 427 aa4.37□□□□□ -1.71
TRAV40-201ENST00000390467 HOMER2Q9NSB8 354 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms