RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ZGPATQ8N5A5 531 aaKnown RBP0.81□□□□□ -2.28
SNORD28-201ENST00000384706 PPM1NQ8N819 430 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 CLRN3Q8NCR9 226 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 OR2I1PQ8NGU4 316 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 DDX55Q8NHQ9 600 aaKnown RBP eCLIP0.81□□□□□ -2.28
SNORD28-201ENST00000384706 HOXB13Q92826 284 aaPredicted RBP0.81□□□□□ -2.28
SNORD28-201ENST00000384706 USP7Q93009 1102 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 RAB24Q969Q5 203 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 FKBP10Q96AY3 582 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 REPS1Q96D71 796 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 MRFAP1L1Q96HT8 127 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 LRIG1Q96JA1 1093 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 MARK4Q96L34 752 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 RNPC3Q96LT9 517 aaKnown RBP0.81□□□□□ -2.28
SNORD28-201ENST00000384706 KLHL32Q96NJ5 620 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 ACAP3Q96P50 834 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 ASB2Q96Q27 587 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 SLC2A13Q96QE2 648 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 TRIB1Q96RU8 372 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 ORAI2Q96SN7 254 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 DNAJC2Q99543 621 aaKnown RBP0.81□□□□□ -2.28
SNORD28-201ENST00000384706 SMOQ99835 787 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 C7orf25Q9BPX7 421 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 ALG8Q9BVK2 526 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 TARS2Q9BW92 718 aaKnown RBP0.81□□□□□ -2.28
SNORD28-201ENST00000384706 ACTRT3Q9BYD9 372 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 AMBRA1Q9C0C7 1298 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 C11orf54Q9H0W9 315 aaPredicted RBP0.81□□□□□ -2.28
SNORD28-201ENST00000384706 OSBPL2Q9H1P3 480 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 HIPK2Q9H2X6 1198 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 FOXP1Q9H334 677 aaPredicted RBP0.81□□□□□ -2.28
SNORD28-201ENST00000384706 SMOC2Q9H3U7 446 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 MANSC1Q9H8J5 431 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 PDGFCQ9NRA1 345 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 EHD3Q9NZN3 535 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 KLHL13Q9P2N7 655 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 SCOCQ9UIL1 159 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 INTUQ9ULD6 942 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 SLC45A2Q9UMX9 530 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 PCDHGA2Q9Y5H1 932 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 FNDC1Q4ZHG4 1894 aaPredicted RBP0.81□□□□□ -2.28
SNORD28-201ENST00000384706 WDR17Q8IZU2 1322 aa0.81□□□□□ -2.28
SNORD28-201ENST00000384706 FAM90A10PA6NDY2 464 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 FAM171A2A8MVW0 826 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 PRSS44E7EML9 344 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 E7ENX8 843 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 H0YIZ8 118 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 H3BNX3 289 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 POLRMTO00411 1230 aaKnown RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 NEMP1O14524 444 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 FCHO1O14526 889 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 ADAM10O14672 748 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 PPM1DO15297 605 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 EXOC3O60645 756 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 VPS4BO75351 444 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 ULK1O75385 1050 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 ABLIM3O94929 683 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 GAS8-AS1O95177 125 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 CRYABP02511 175 aaKnown RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 FGBP02675 491 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TMEM191BP0C7N4 346 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 MTHFD1P11586 935 aaKnown RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 KRT10P13645 584 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 OSMP13725 252 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 PRF1P14222 555 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 ENGP17813 658 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 ATP5F1P24539 256 aaPredicted RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 IL1R2P27930 398 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 THBS3P49746 956 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 NDUFV1P49821 464 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 HTR6P50406 440 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 SESN3P58005 492 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 ZNF280AP59817 542 aaPredicted RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 NANOS2P60321 138 aaKnown RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 CTXN1P60606 82 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 POU6F2P78424 691 aaPredicted RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 ATP8B2P98198 1209 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 SRSF2Q01130 221 aaKnown RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TAP2Q03519 686 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 PIGFQ07326 219 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 MGAT2Q10469 447 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 FHL3Q13643 280 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 SEMA3AQ14563 771 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 RBMS2Q15434 407 aaKnown RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 NPY5RQ15761 445 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TRIM71Q2Q1W2 868 aaKnown RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 ANO4Q32M45 955 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TKFCQ3LXA3 575 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 FLYWCH1Q4VC44 716 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 PABPC1LQ4VXU2 614 aaKnown RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 ZNF628Q5EBL2 1059 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 AARS2Q5JTZ9 985 aaKnown RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 RBM20Q5T481 1227 aaKnown RBP0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TAPT1Q6NXT6 567 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 ANKRD16Q6P6B7 361 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 TMPRSS9Q7Z410 1059 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 KCNK18Q7Z418 384 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 HOMER1Q86YM7 354 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 NIM1KQ8IY84 436 aa0.8□□□□□ -2.28
SNORD28-201ENST00000384706 GALNT16Q8N428 558 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms