RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 YARSP54577 528 aaKnown RBP9.47□□□□□ -0.89
GPNMB-202ENST00000381990 IL9RQ01113 521 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 ENPEPQ07075 957 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 NR1H3Q13133 447 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 KCTD19Q17RG1 926 aaPredicted RBP9.47□□□□□ -0.89
GPNMB-202ENST00000381990 CCDC62Q6P9F0 684 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 RHBDF2Q6PJF5 856 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 CEP128Q6ZU80 1094 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 USP37Q86T82 979 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 CCDC25Q86WR0 208 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 LMNTD2Q8IXW0 634 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 RIBC1Q8N443 379 aaPredicted RBP9.47□□□□□ -0.89
GPNMB-202ENST00000381990 UHMK1Q8TAS1 419 aaKnown RBP9.47□□□□□ -0.89
GPNMB-202ENST00000381990 MGARPQ8TDB4 240 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 GRK7Q8WTQ7 553 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 MAIP1Q8WWC4 291 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 MS4A4AQ96JQ5 239 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 KCNK9Q9NPC2 374 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 USP20Q9Y2K6 914 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 STARD13Q9Y3M8 1113 aa9.47□□□□□ -0.89
GPNMB-202ENST00000381990 PDHXO00330 501 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 NOP56O00567 594 aaKnown RBP9.46□□□□□ -0.89
GPNMB-202ENST00000381990 AHCYL1O43865 530 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 LGR5O75473 907 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 ACSL3O95573 720 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 PYGMP11217 842 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 GNAZP19086 355 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 GLRA2P23416 452 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 RWDD2BP57060 319 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 SF3A3Q12874 501 aaKnown RBP eCLIP9.46□□□□□ -0.89
GPNMB-202ENST00000381990 SIX1Q15475 284 aaPredicted RBP9.46□□□□□ -0.89
GPNMB-202ENST00000381990 PHLDB3Q6NSJ2 640 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 ZDHHC14Q8IZN3 488 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 GPD1LQ8N335 351 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 DEPTORQ8TB45 409 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 ASAP3Q8TDY4 903 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 PARD3BQ8TEW8 1205 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 BICD1Q96G01 975 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 SNF8Q96H20 258 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 RMDN2Q96LZ7 410 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 MFSD14AQ96MC6 490 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 GPR20Q99678 358 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 CCDC77Q9BR77 488 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 KIF9Q9HAQ2 790 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 GGT7Q9UJ14 662 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 PTPN22Q9Y2R2 807 aa9.46□□□□□ -0.89
GPNMB-202ENST00000381990 CCL15-CCL14A0A0B4J2E2 113 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 A8MUI8 341 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 MAGEB2O15479 319 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 MAFO75444 373 aaPredicted RBP9.46□□□□□ -0.9
GPNMB-202ENST00000381990 DCTN3O75935 186 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 GTF2H1P32780 548 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 SLC18A1P54219 525 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 CCL15Q16663 113 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 UBAP2Q5T6F2 1119 aaKnown RBP9.46□□□□□ -0.9
GPNMB-202ENST00000381990 AP1ARQ63HQ0 302 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 AADACL2Q6P093 401 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 PALB2Q86YC2 1186 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 RELL1Q8IUW5 271 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 FBXO16Q8IX29 292 aaPredicted RBP9.46□□□□□ -0.9
GPNMB-202ENST00000381990 DHX37Q8IY37 1157 aaKnown RBP9.46□□□□□ -0.9
GPNMB-202ENST00000381990 ENDOVQ8N8Q3 282 aaKnown RBP9.46□□□□□ -0.9
GPNMB-202ENST00000381990 TRAIPQ9BWF2 469 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 OSBPL1AQ9BXW6 950 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 PITPNM3Q9BZ71 974 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 TMEM117Q9H0C3 514 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 KIAA1586Q9HCI6 787 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 UBN1Q9NPG3 1134 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 AAASQ9NRG9 546 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 UVRAGQ9P2Y5 699 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 SRCAPQ6ZRS2 3230 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 SIP14410 1827 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 LRRIQ4A6NIV6 560 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 BTBD19C9JJ37 291 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 FOXN3O00409 490 aaPredicted RBP9.46□□□□□ -0.9
GPNMB-202ENST00000381990 SPOPO43791 374 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 HNRNPCL1O60812 293 aaKnown RBP9.46□□□□□ -0.9
GPNMB-202ENST00000381990 GAS8O95995 478 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 PIGRP01833 764 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 LMNAP02545 664 aaKnown RBP9.46□□□□□ -0.9
GPNMB-202ENST00000381990 NEFHP12036 1026 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 ALDH3A1P30838 453 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 GCLCP48506 637 aaPredicted RBP9.46□□□□□ -0.9
GPNMB-202ENST00000381990 MARCKSL1P49006 195 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 LIG4P49917 911 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 CYP24A1Q07973 514 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 STAT4Q14765 748 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 RBBP5Q15291 538 aaKnown RBP9.46□□□□□ -0.9
GPNMB-202ENST00000381990 HSDL1Q3SXM5 330 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 RGS9BPQ6ZS82 235 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 PLPPR4Q7Z2D5 763 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 ANKRD23Q86SG2 305 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 ECHDC2Q86YB7 292 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 ANKRD42Q8N9B4 389 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 BBOF1Q8ND07 529 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 STK32AQ8WU08 396 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 DDX23Q9BUQ8 820 aaKnown RBP9.46□□□□□ -0.9
GPNMB-202ENST00000381990 GBA2Q9HCG7 927 aaPredicted RBP9.46□□□□□ -0.9
GPNMB-202ENST00000381990 TMEM8AQ9HCN3 771 aa9.46□□□□□ -0.9
GPNMB-202ENST00000381990 COQ4Q9Y3A0 265 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms