RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 NEU2Q9Y3R4 380 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 MAGEA13PA6NCF6 341 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 NLRP11P59045 1033 aaKnown RBP14.64□□□□□ -0.07
SNPH-201ENST00000381867 NSL1Q96IY1 281 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 C9orf72Q96LT7 481 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.64□□□□□ -0.07
SNPH-201ENST00000381867 NEMP1O14524 444 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 RPLP2P05387 115 aaKnown RBP14.64□□□□□ -0.07
SNPH-201ENST00000381867 VCAM1P19320 739 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 TRIM9Q9C026 710 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 MROH8Q9H579 483 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 CD248Q9HCU0 757 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 POLD4Q9HCU8 107 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 TMX2Q9Y320 296 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 CYP26A1O43174 497 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 HNRNPRO43390 633 aaKnown RBP14.64□□□□□ -0.07
SNPH-201ENST00000381867 GAS2O43903 313 aaKnown RBP14.64□□□□□ -0.07
SNPH-201ENST00000381867 KRT16P08779 473 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 FXR2P51116 673 aaKnown RBP eCLIP14.64□□□□□ -0.07
SNPH-201ENST00000381867 TROAPQ12815 778 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 SMAD1Q15797 465 aaKnown RBP14.64□□□□□ -0.07
SNPH-201ENST00000381867 OR6P1Q8NGX9 317 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 ATXN7L3BQ96GX2 97 aa14.64□□□□□ -0.07
SNPH-201ENST00000381867 COPG1Q9Y678 874 aaKnown RBP14.64□□□□□ -0.07
SNPH-201ENST00000381867 PHLPP1O60346 1717 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 CELF2O95319 508 aaKnown RBP14.63□□□□□ -0.07
SNPH-201ENST00000381867 YWHABP31946 246 aaKnown RBP14.63□□□□□ -0.07
SNPH-201ENST00000381867 ZNF200P98182 395 aaPredicted RBP14.63□□□□□ -0.07
SNPH-201ENST00000381867 NAB2Q15742 525 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 SLC44A4Q53GD3 710 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 CLEC4FQ8N1N0 589 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 NOA1Q8NC60 698 aaKnown RBP14.63□□□□□ -0.07
SNPH-201ENST00000381867 C10orf88Q9H8K7 445 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 GID8Q9NWU2 228 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 MARCOQ9UEW3 520 aaPredicted RBP14.63□□□□□ -0.07
SNPH-201ENST00000381867 MAD2L2Q9UI95 211 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 HSPA13P48723 471 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 PRUNE1Q86TP1 453 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 EPAS1Q99814 870 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 C7orf25Q9BPX7 421 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 AGPAT5Q9NUQ2 364 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 A0A1B0GW55 424 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 A0A1W2PQJ5 194 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 EFCAB14O75071 495 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 DUX4L2P0CJ85 424 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 DUX4L3P0CJ86 424 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 DUX4L4P0CJ87 422 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 DUX4L5P0CJ88 424 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 DUX4L6P0CJ89 424 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 DUX4L7P0CJ90 424 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 SERPINB1P30740 379 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 GUCY1A2P33402 732 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 BACE1P56817 501 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 PTK2BQ14289 1009 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 KRT72Q14CN4 511 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 GALNT4Q8N4A0 578 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 USP38Q8NB14 1042 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 HIC2Q96JB3 615 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 PPP1R36Q96LQ0 422 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 DUX4Q9UBX2 424 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 ZC3H7BQ9UGR2 993 aaKnown RBP14.63□□□□□ -0.07
SNPH-201ENST00000381867 SPAG6O75602 509 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 CTCFP49711 727 aaPredicted RBP14.63□□□□□ -0.07
SNPH-201ENST00000381867 PID1Q7Z2X4 250 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 MMTAG2Q9BU76 263 aaKnown RBP14.63□□□□□ -0.07
SNPH-201ENST00000381867 MOV10L1Q9BXT6 1211 aaKnown RBP14.63□□□□□ -0.07
SNPH-201ENST00000381867 KDM4CQ9H3R0 1056 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 APEX2Q9UBZ4 518 aa14.63□□□□□ -0.07
SNPH-201ENST00000381867 AP3B1O00203 1094 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 KCNN4O15554 427 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 SETD3Q86TU7 594 aaPredicted RBP14.62□□□□□ -0.07
SNPH-201ENST00000381867 PDCD6IPQ8WUM4 868 aaKnown RBP14.62□□□□□ -0.07
SNPH-201ENST00000381867 TEKT4Q8WW24 435 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 ANKEF1Q9NU02 776 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 UBA6A0AVT1 1052 aaPredicted RBP14.62□□□□□ -0.07
SNPH-201ENST00000381867 M0R3G1 203 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 PTK7Q13308 1070 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 KPNB1Q14974 876 aaKnown RBP14.62□□□□□ -0.07
SNPH-201ENST00000381867 PCYOX1LQ8NBM8 494 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 ZNF668Q96K58 619 aaPredicted RBP14.62□□□□□ -0.07
SNPH-201ENST00000381867 PRPF18Q99633 342 aaKnown RBP14.62□□□□□ -0.07
SNPH-201ENST00000381867 NUDT12Q9BQG2 462 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 TCRBV5S4A2TA0A5A2 114 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 ATP9BO43861 1147 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 RHOBTB3O94955 611 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 TTC30BQ8N4P2 665 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 PGBD4Q96DM1 585 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 SMARCAL1Q9NZC9 954 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 PCDHGB4Q9UN71 923 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 HOXC6P09630 235 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 VEGFAP15692 232 aaPredicted RBP14.62□□□□□ -0.07
SNPH-201ENST00000381867 TM4SF1P30408 202 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 SESN2P58004 480 aaPredicted RBP14.62□□□□□ -0.07
SNPH-201ENST00000381867 OTUB1Q96FW1 271 aaPredicted RBP14.62□□□□□ -0.07
SNPH-201ENST00000381867 ZNF560Q96MR9 790 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 SP110Q9HB58 689 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 C20orf96Q9NUD7 363 aaPredicted RBP14.62□□□□□ -0.07
SNPH-201ENST00000381867 RBAKQ9NYW8 714 aaPredicted RBP14.62□□□□□ -0.07
SNPH-201ENST00000381867 AIPL1Q9NZN9 384 aa14.62□□□□□ -0.07
SNPH-201ENST00000381867 XPO7Q9UIA9 1087 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms