RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 CNOT8Q9UFF9 292 aaKnown RBP11.65□□□□□ -0.54
FAM239A-201ENST00000381108 UBQLN1Q9UMX0 589 aaKnown RBP11.65□□□□□ -0.54
FAM239A-201ENST00000381108 LAMA2P24043 3122 aaKnown RBP11.64□□□□□ -0.55
FAM239A-201ENST00000381108 PDE2AO00408 941 aaPredicted RBP11.64□□□□□ -0.55
FAM239A-201ENST00000381108 MGEA5O60502 916 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 CYP1A1P04798 512 aaPredicted RBP11.64□□□□□ -0.55
FAM239A-201ENST00000381108 RPLP2P05387 115 aaKnown RBP11.64□□□□□ -0.55
FAM239A-201ENST00000381108 RRM1P23921 792 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 AFF1P51825 1210 aaKnown RBP11.64□□□□□ -0.55
FAM239A-201ENST00000381108 RAD23BP54727 409 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 CKAP4Q07065 602 aaKnown RBP11.64□□□□□ -0.55
FAM239A-201ENST00000381108 RPS6KA1Q15418 735 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 SMYD5Q6GMV2 418 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 CC2D1AQ6P1N0 951 aaPredicted RBP11.64□□□□□ -0.55
FAM239A-201ENST00000381108 MSANTD4Q8NCY6 345 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 C1orf131Q8NDD1 294 aaKnown RBP11.64□□□□□ -0.55
FAM239A-201ENST00000381108 ZNF564Q8TBZ8 553 aaPredicted RBP11.64□□□□□ -0.55
FAM239A-201ENST00000381108 MS4A14Q96JA4 679 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 DEFB118Q96PH6 123 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 TSEN34Q9BSV6 310 aaKnown RBP11.64□□□□□ -0.55
FAM239A-201ENST00000381108 KDM4CQ9H3R0 1056 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 GTF3C4Q9UKN8 822 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 KCNK3O14649 394 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 PTGESO14684 152 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 CILPO75339 1184 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 CKBP12277 381 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 ITGA4P13612 1032 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 TCP1P17987 556 aaKnown RBP11.64□□□□□ -0.55
FAM239A-201ENST00000381108 NDST1P52848 882 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 RNASE9P60153 205 aaKnown RBP11.64□□□□□ -0.55
FAM239A-201ENST00000381108 MESDQ14696 234 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 TRIM71Q2Q1W2 868 aaKnown RBP11.64□□□□□ -0.55
FAM239A-201ENST00000381108 CCDC181Q5TID7 509 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 TRIM72Q6ZMU5 477 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 MMS22LQ6ZRQ5 1243 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 NT5DC3Q86UY8 548 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 CREG2Q8IUH2 290 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 MCOLN2Q8IZK6 566 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 SYCE1Q8N0S2 351 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 WHAMMQ8TF30 809 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 GAD1Q99259 594 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 PARD6BQ9BYG5 372 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 ELOVL4Q9GZR5 314 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 ERVK-5Q9HDB9 667 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 ADAM22Q9P0K1 906 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 RAB21Q9UL25 225 aa11.64□□□□□ -0.55
FAM239A-201ENST00000381108 A0A0U1RQG5 324 aaPredicted RBP11.63□□□□□ -0.55
FAM239A-201ENST00000381108 KIF4AO95239 1232 aa11.63□□□□□ -0.55
FAM239A-201ENST00000381108 CYP1A2P05177 515 aa11.63□□□□□ -0.55
FAM239A-201ENST00000381108 KCNE1P15382 129 aa11.63□□□□□ -0.55
FAM239A-201ENST00000381108 PTPN11Q06124 597 aaPredicted RBP11.63□□□□□ -0.55
FAM239A-201ENST00000381108 MON1BQ7L1V2 547 aa11.63□□□□□ -0.55
FAM239A-201ENST00000381108 SLC4A11Q8NBS3 891 aa11.63□□□□□ -0.55
FAM239A-201ENST00000381108 NOA1Q8NC60 698 aaKnown RBP11.63□□□□□ -0.55
FAM239A-201ENST00000381108 TMEM176AQ96HP8 235 aa11.63□□□□□ -0.55
FAM239A-201ENST00000381108 MRPL45Q9BRJ2 306 aaKnown RBP11.63□□□□□ -0.55
FAM239A-201ENST00000381108 CYP3A43Q9HB55 503 aa11.63□□□□□ -0.55
FAM239A-201ENST00000381108 CHST12Q9NRB3 414 aa11.63□□□□□ -0.55
FAM239A-201ENST00000381108 AMFRQ9UKV5 643 aa11.63□□□□□ -0.55
FAM239A-201ENST00000381108 XPOTO43592 962 aaKnown RBP11.62□□□□□ -0.55
FAM239A-201ENST00000381108 CD4P01730 458 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 C2orf54Q08AI8 447 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 TERF2Q15554 542 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 XKR4Q5GH76 650 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 SLFN11Q7Z7L1 901 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 HACE1Q8IYU2 909 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 LRRC52Q8N7C0 313 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 HEXIM2Q96MH2 286 aaKnown RBP11.62□□□□□ -0.55
FAM239A-201ENST00000381108 RPS6KC1Q96S38 1066 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 ADAM2Q99965 735 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 TRIM7Q9C029 511 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 RNF208Q9H0X6 261 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 ANAPC7Q9UJX3 599 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 BARX2Q9UMQ3 279 aaPredicted RBP11.62□□□□□ -0.55
FAM239A-201ENST00000381108 PTPN22Q9Y2R2 807 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 ARVCFO00192 962 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 SPTLC1O15269 473 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 GJB6O95452 261 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 STAU1O95793 577 aaKnown RBP11.62□□□□□ -0.55
FAM239A-201ENST00000381108 PRLRP16471 622 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 ATF7P17544 494 aaPredicted RBP11.62□□□□□ -0.55
FAM239A-201ENST00000381108 SCNN1GP51170 649 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 INCA1Q0VD86 236 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 DENND1BQ6P3S1 775 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 AGMOQ6ZNB7 445 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 CPNE8Q86YQ8 564 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 C12orf29Q8N999 325 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 TMEM35BQ8NCS4 154 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 FAXDC2Q96IV6 333 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 ACBD3Q9H3P7 528 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 CEP83Q9Y592 693 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 ALG6Q9Y672 507 aa11.62□□□□□ -0.55
FAM239A-201ENST00000381108 ARL5CA6NH57 179 aa11.61□□□□□ -0.55
FAM239A-201ENST00000381108 KPNA7A9QM74 516 aa11.61□□□□□ -0.55
FAM239A-201ENST00000381108 PIRO00625 290 aa11.61□□□□□ -0.55
FAM239A-201ENST00000381108 HCRTO43612 131 aa11.61□□□□□ -0.55
FAM239A-201ENST00000381108 PAEPP09466 180 aa11.61□□□□□ -0.55
FAM239A-201ENST00000381108 RHOXF2BP0C7M4 288 aa11.61□□□□□ -0.55
FAM239A-201ENST00000381108 MBTPS1Q14703 1052 aa11.61□□□□□ -0.55
FAM239A-201ENST00000381108 CYP4A22Q5TCH4 519 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms