RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ATL1Q8WXF7 558 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 PGBD4Q96DM1 585 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 FBXL18Q96ME1 805 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 BIRC8Q96P09 236 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 PLIN2Q99541 437 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 TRIM51Q9BSJ1 452 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 WNK3Q9BYP7 1800 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 TRIM49BA6NDI0 452 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 SPAG7O75391 227 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 ZWINTO95229 277 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 AQP4P55087 323 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 B2MP61769 119 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 PPP2R2BQ00005 443 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 CCDC14Q49A88 953 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 NXNQ6DKJ4 435 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 NEK5Q6P3R8 708 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 SLC51BQ86UW2 128 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 PCYOX1LQ8NBM8 494 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 SCFD2Q8WU76 684 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 CHPT1Q8WUD6 406 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 SYMPKQ92797 1274 aaKnown RBP9.83□□□□□ -0.84
PTPRA-204ENST00000380393 PMEPA1Q969W9 287 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 AIFM2Q9BRQ8 373 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 TXLNGYQ9BZA5 131 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 SAR1AQ9NR31 198 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 NKIRAS1Q9NYS0 192 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 NCKIPSDQ9NZQ3 722 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 GMIPQ9P107 970 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 IP6K2Q9UHH9 426 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 CEPT1Q9Y6K0 416 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 TAC1P20366 129 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 IL32P24001 234 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 PGM1P36871 562 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 ZAP70P43403 619 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 ZNF135P52742 658 aaPredicted RBP9.83□□□□□ -0.84
PTPRA-204ENST00000380393 PLTPP55058 493 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 FOLH1Q04609 750 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 RPS6KA1Q15418 735 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 C10orf76Q5T2E6 689 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 PAOXQ6QHF9 649 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 VSTM1Q6UX27 236 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 LRRC6Q86X45 466 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 TMEM151BQ8IW70 566 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 Q8N9G6 341 aaPredicted RBP9.83□□□□□ -0.84
PTPRA-204ENST00000380393 ZNF507Q8TCN5 953 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 ZDHHC7Q9NXF8 308 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 PI4KBQ9UBF8 816 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 PITPNM2Q9BZ72 1349 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 A0A087X0B3 334 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 H3BUI4 141 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 AP1G1O43747 822 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 CTRB1P17538 263 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 SLC1A4P43007 532 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 RFX5P48382 616 aaPredicted RBP9.83□□□□□ -0.84
PTPRA-204ENST00000380393 KRT6CP48668 564 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 MAP3K7CLP57077 242 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 STILQ15468 1287 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 SGO2Q562F6 1265 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 CTRB2Q6GPI1 263 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 HEATR4Q86WZ0 1026 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 TAMM41Q96BW9 452 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 ASIC4Q96FT7 647 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 TTYH3Q9C0H2 523 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 C12orf10Q9HB07 376 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 PCDH12Q9NPG4 1184 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 PPM1HQ9ULR3 514 aa9.83□□□□□ -0.84
PTPRA-204ENST00000380393 ENPP3O14638 875 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 PJA2O43164 708 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 ITM2AO43736 263 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 ZNF254O75437 659 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 GMNNO75496 209 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 ESRRBO95718 433 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 BRAFP15056 766 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 STRN3Q13033 797 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 DNAJC3Q13217 504 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 SPCS2Q15005 226 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 RGS21Q2M5E4 152 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 MEI1Q5TIA1 1274 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 BORAQ6PGQ7 559 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 BTNL9Q6UXG8 535 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 TMC5Q6UXY8 1006 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 KIF6Q6ZMV9 814 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 LPCAT2Q7L5N7 544 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 MTDHQ86UE4 582 aaKnown RBP9.82□□□□□ -0.84
PTPRA-204ENST00000380393 TBC1D10CQ8IV04 446 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 PROM2Q8N271 834 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 CPSF7Q8N684 471 aaKnown RBP9.82□□□□□ -0.84
PTPRA-204ENST00000380393 ALLCQ8N6M5 410 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 SH3RF3Q8TEJ3 882 aaPredicted RBP9.82□□□□□ -0.84
PTPRA-204ENST00000380393 DDI1Q8WTU0 396 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 VPS35Q96QK1 796 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 SEMA4AQ9H3S1 761 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 C10orf88Q9H8K7 445 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 NEK6Q9HC98 313 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 AGO2Q9UKV8 859 aaKnown RBP9.82□□□□□ -0.84
PTPRA-204ENST00000380393 ATP11BQ9Y2G3 1177 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 GDAQ9Y2T3 454 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 MYH14Q7Z406 1995 aaKnown RBP9.82□□□□□ -0.84
PTPRA-204ENST00000380393 PCM1Q15154 2024 aa9.82□□□□□ -0.84
PTPRA-204ENST00000380393 KRBA1A5PL33 1030 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms