RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 SGO2Q562F6 1265 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 DNAJC21Q5F1R6 531 aaKnown RBP22.87■■□□□ 1.25
TRIM54-202ENST00000380075 HOOK3Q86VS8 718 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 TRIM50Q86XT4 487 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 RHOT1Q8IXI2 618 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 LRRC71Q8N4P6 559 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 FBXO25Q8TCJ0 367 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 GRK7Q8WTQ7 553 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 ZNF606Q8WXB4 792 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 DDX27Q96GQ7 796 aaKnown RBP22.87■■□□□ 1.25
TRIM54-202ENST00000380075 ZNF518BQ9C0D4 1074 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 PTPRHQ9HD43 1115 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 HMX1Q9NP08 348 aaPredicted RBP22.87■■□□□ 1.25
TRIM54-202ENST00000380075 UMODL1Q5DID0 1318 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.87■■□□□ 1.25
TRIM54-202ENST00000380075 TCRBV7S2A1N4TA0A589 114 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 TXNP10599 105 aaKnown RBP22.87■■□□□ 1.25
TRIM54-202ENST00000380075 ADCYAP1R1P41586 468 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 YWHAEP62258 255 aaKnown RBP22.87■■□□□ 1.25
TRIM54-202ENST00000380075 TRPC3Q13507 836 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 SLMAPQ14BN4 828 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 SEZ6Q53EL9 994 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 FAXDC2Q96IV6 333 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 MTMR12Q9C0I1 747 aa22.87■■□□□ 1.25
TRIM54-202ENST00000380075 ADCY6O43306 1168 aa22.86■■□□□ 1.25
TRIM54-202ENST00000380075 B4GALT4O60513 344 aa22.86■■□□□ 1.25
TRIM54-202ENST00000380075 CALB1P05937 261 aa22.86■■□□□ 1.25
TRIM54-202ENST00000380075 POU5F1BQ06416 359 aa22.86■■□□□ 1.25
TRIM54-202ENST00000380075 ATF7IP2Q5U623 682 aa22.86■■□□□ 1.25
TRIM54-202ENST00000380075 RHPN2Q8IUC4 686 aa22.86■■□□□ 1.25
TRIM54-202ENST00000380075 IL18RAPO95256 599 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 CST3P01034 146 aaPredicted RBP22.85■■□□□ 1.25
TRIM54-202ENST00000380075 CCL5P13501 91 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 MMP8P22894 467 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 IFFO1Q0D2I5 559 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 KATNAL2Q8IYT4 538 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 OR2W6PQ8NHA6 318 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 FEZF2Q8TBJ5 459 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 ART4Q93070 314 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 TRIM7Q9C029 511 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 ERAP1Q9NZ08 941 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 IP6K2Q9UHH9 426 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 SEPT4O43236 478 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 TNNC2P02585 160 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 TMEM191BP0C7N4 346 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 ZNF484Q5JVG2 852 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 PASD1Q8IV76 773 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 LENG1Q96BZ8 264 aaPredicted RBP22.85■■□□□ 1.25
TRIM54-202ENST00000380075 ANKRD36BP1Q96IX9 119 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 RNF208Q9H0X6 261 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 WHRNQ9P202 907 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 TNFSF13BQ9Y275 285 aa22.85■■□□□ 1.25
TRIM54-202ENST00000380075 RBM47A0AV96 593 aaKnown RBP22.84■■□□□ 1.25
TRIM54-202ENST00000380075 MDH1P40925 334 aaKnown RBP22.84■■□□□ 1.25
TRIM54-202ENST00000380075 ATP1A2P50993 1020 aa22.84■■□□□ 1.25
TRIM54-202ENST00000380075 MYL6P60660 151 aa22.84■■□□□ 1.25
TRIM54-202ENST00000380075 TAP1Q03518 808 aa22.84■■□□□ 1.25
TRIM54-202ENST00000380075 CALCOCO2Q13137 446 aa22.84■■□□□ 1.25
TRIM54-202ENST00000380075 PDCLQ13371 301 aa22.84■■□□□ 1.25
TRIM54-202ENST00000380075 PPP1R7Q15435 360 aa22.84■■□□□ 1.25
TRIM54-202ENST00000380075 ZNF568Q3ZCX4 644 aa22.84■■□□□ 1.25
TRIM54-202ENST00000380075 DENND2CQ68D51 928 aa22.84■■□□□ 1.25
TRIM54-202ENST00000380075 MMS22LQ6ZRQ5 1243 aa22.84■■□□□ 1.25
TRIM54-202ENST00000380075 TMEM35BQ8NCS4 154 aa22.84■■□□□ 1.25
TRIM54-202ENST00000380075 BCAS4Q8TDM0 211 aa22.84■■□□□ 1.25
TRIM54-202ENST00000380075 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.84■■□□□ 1.25
TRIM54-202ENST00000380075 CFHP08603 1231 aa22.83■■□□□ 1.25
TRIM54-202ENST00000380075 AKR1A1P14550 325 aa22.83■■□□□ 1.25
TRIM54-202ENST00000380075 SMPD1P17405 629 aa22.83■■□□□ 1.25
TRIM54-202ENST00000380075 CETN2P41208 172 aa22.83■■□□□ 1.25
TRIM54-202ENST00000380075 KRT71Q3SY84 523 aa22.83■■□□□ 1.25
TRIM54-202ENST00000380075 GJC2Q5T442 439 aaPredicted RBP22.83■■□□□ 1.25
TRIM54-202ENST00000380075 IQSEC1Q6DN90 963 aa22.83■■□□□ 1.25
TRIM54-202ENST00000380075 EFCAB12Q6NXP0 572 aa22.83■■□□□ 1.25
TRIM54-202ENST00000380075 EXD1Q8NHP7 514 aa22.83■■□□□ 1.25
TRIM54-202ENST00000380075 TSPYL1Q9H0U9 437 aa22.83■■□□□ 1.25
TRIM54-202ENST00000380075 CENPHQ9H3R5 247 aa22.83■■□□□ 1.25
TRIM54-202ENST00000380075 CISHQ9NSE2 258 aa22.83■■□□□ 1.25
TRIM54-202ENST00000380075 PRMT7Q9NVM4 692 aaPredicted RBP22.83■■□□□ 1.25
TRIM54-202ENST00000380075 PCDHGC3Q9UN70 934 aa22.83■■□□□ 1.25
TRIM54-202ENST00000380075 TLR3O15455 904 aaKnown RBP22.83■■□□□ 1.24
TRIM54-202ENST00000380075 GAS8O95995 478 aa22.83■■□□□ 1.24
TRIM54-202ENST00000380075 RARGP13631 454 aa22.83■■□□□ 1.24
TRIM54-202ENST00000380075 CDH5P33151 784 aaPredicted RBP22.83■■□□□ 1.24
TRIM54-202ENST00000380075 TNFAIP2Q03169 654 aa22.83■■□□□ 1.24
TRIM54-202ENST00000380075 LAMC2Q13753 1193 aa22.83■■□□□ 1.24
TRIM54-202ENST00000380075 FAM187BQ17R55 369 aa22.83■■□□□ 1.24
TRIM54-202ENST00000380075 ZNF699Q32M78 642 aa22.83■■□□□ 1.24
TRIM54-202ENST00000380075 FAM212AQ96EL1 285 aa22.83■■□□□ 1.24
TRIM54-202ENST00000380075 NLRP4Q96MN2 994 aa22.83■■□□□ 1.24
TRIM54-202ENST00000380075 PAK6Q9NQU5 681 aaPredicted RBP22.83■■□□□ 1.24
TRIM54-202ENST00000380075 CEP83Q9Y592 693 aa22.83■■□□□ 1.24
TRIM54-202ENST00000380075 INO80B-WBP1J3KQ70 363 aa22.82■■□□□ 1.24
TRIM54-202ENST00000380075 EIF4BP23588 611 aaKnown RBP22.82■■□□□ 1.24
TRIM54-202ENST00000380075 TFAMQ00059 246 aaKnown RBP22.82■■□□□ 1.24
TRIM54-202ENST00000380075 MBTD1Q05BQ5 628 aa22.82■■□□□ 1.24
TRIM54-202ENST00000380075 PTK6Q13882 451 aa22.82■■□□□ 1.24
TRIM54-202ENST00000380075 INO80BQ9C086 356 aaPredicted RBP22.82■■□□□ 1.24
TRIM54-202ENST00000380075 DCLK3Q9C098 648 aa22.82■■□□□ 1.24
TRIM54-202ENST00000380075 EPB41L4BQ9H329 900 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms