RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 PTPRJQ12913 1337 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 MYO10Q9HD67 2058 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 STK25O00506 426 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 SOAT2O75908 522 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 ZNF202O95125 648 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 CYP11A1P05108 521 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 CEBPBP17676 345 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 EPHB3P54753 998 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 SNRPFP62306 86 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 TSPY1Q01534 308 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 CYP24A1Q07973 514 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 PSMD2Q13200 908 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 GPR17Q13304 367 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 SLC5A9Q2M3M2 681 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 MGAT5BQ3V5L5 792 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 PARM1Q6UWI2 310 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 MTSS1LQ765P7 747 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 WDR49Q8IV35 697 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 NPAS3Q8IXF0 933 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 HS6ST3Q8IZP7 471 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 FBXL6Q8N531 539 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 LRRC52Q8N7C0 313 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 FLCNQ8NFG4 579 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 GOLGA5Q8TBA6 731 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 MCRS1Q96EZ8 462 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 CGRRF1Q99675 332 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 ABI2Q9NYB9 513 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 CGNQ9P2M7 1197 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 SIX4Q9UIU6 781 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 MAFFQ9ULX9 164 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 ZFP37Q9Y6Q3 630 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 TSC2P49815 1807 aa12.45□□□□□ -0.42
SMARCE1-203ENST00000377808 DOCK6Q96HP0 2047 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 FAM237AA0A1B0GTK4 181 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 ZNF197O14709 1029 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 PHACTR2O75167 634 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 PRPF40AO75400 957 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 KIF20AO95235 890 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 VNN2O95498 520 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 ACAT1P24752 427 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 MYL7Q01449 175 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 HTR4Q13639 388 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 PSMD6Q15008 389 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 TAF12Q16514 161 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 SCARA3Q6AZY7 606 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 CENPPQ6IPU0 288 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 BMP8AQ7Z5Y6 402 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 DCP1BQ8IZD4 617 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 ADGRF2Q8IZF7 708 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 PDCL2Q8N4E4 241 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 SLC44A3Q8N4M1 653 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 TTC9BQ8N6N2 239 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 FGF14Q92915 247 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 NXPE3Q969Y0 559 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 TCEAL4Q96EI5 215 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 BORCS6Q96GS4 357 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 HPDLQ96IR7 371 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 KXD1Q9BQD3 176 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 ZCWPW1Q9H0M4 648 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 CRISPLD1Q9H336 500 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 SLITRK6Q9H5Y7 841 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 DDX43Q9NXZ2 648 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 CEP72Q9P209 647 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 CA14Q9ULX7 337 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 L1RE1Q9UN81 338 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 MAPK8IP1Q9UQF2 711 aa12.44□□□□□ -0.42
SMARCE1-203ENST00000377808 CALUO43852 315 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 GJA1P17302 382 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 CASP4P49662 377 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 VCPP55072 806 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 DPYDQ12882 1025 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 BIRC3Q13489 604 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 TRPC3Q13507 836 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 VEPH1Q14D04 833 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 CEP135Q66GS9 1140 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 TRAPPC11Q7Z392 1133 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 C12orf56Q8IXR9 622 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 SIX5Q8N196 739 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 TMEM86AQ8N2M4 240 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 FAM122AQ96E09 287 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 MMS19Q96T76 1030 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 LPIN3Q9BQK8 851 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 RTP3Q9BQQ7 232 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 DOCK8Q8NF50 2099 aa12.43□□□□□ -0.42
SMARCE1-203ENST00000377808 ANHXE9PGG2 379 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 RHOBTB3O94955 611 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 NR3C1P04150 777 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 SRFP11831 508 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 CCR2P41597 374 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 TUFMP49411 452 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 TNNC1P63316 161 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 PNOCQ13519 176 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 PRSS36Q5K4E3 855 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 ITIH5Q86UX2 942 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 LRRTM3Q86VH5 581 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 TOP6BLQ8N6T0 577 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 LEMD2Q8NC56 503 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 CXorf38Q8TB03 319 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 SPPL2BQ8TCT7 592 aa12.42□□□□□ -0.42
SMARCE1-203ENST00000377808 GPR152Q8TDT2 470 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms