RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 WARSP23381 471 aaKnown RBP22.77■■□□□ 1.24
CBWD3-202ENST00000377342 ELAVL2Q12926 359 aaKnown RBP22.77■■□□□ 1.24
CBWD3-202ENST00000377342 RTP2Q5QGT7 225 aa22.77■■□□□ 1.24
CBWD3-202ENST00000377342 PDXDC1Q6P996 788 aa22.77■■□□□ 1.24
CBWD3-202ENST00000377342 TMEM86AQ8N2M4 240 aa22.77■■□□□ 1.24
CBWD3-202ENST00000377342 PDLIM2Q96JY6 352 aa22.77■■□□□ 1.24
CBWD3-202ENST00000377342 RTP3Q9BQQ7 232 aa22.77■■□□□ 1.24
CBWD3-202ENST00000377342 MTUS1Q9ULD2 1270 aa22.77■■□□□ 1.24
CBWD3-202ENST00000377342 CNTN6Q9UQ52 1028 aa22.77■■□□□ 1.24
CBWD3-202ENST00000377342 LRRC53A6NM62 1247 aa22.76■■□□□ 1.23
CBWD3-202ENST00000377342 FOXN3O00409 490 aaPredicted RBP22.76■■□□□ 1.23
CBWD3-202ENST00000377342 MFAP3LO75121 409 aa22.76■■□□□ 1.23
CBWD3-202ENST00000377342 ZNF132P52740 706 aa22.76■■□□□ 1.23
CBWD3-202ENST00000377342 ERVK-21P61565 698 aa22.76■■□□□ 1.23
CBWD3-202ENST00000377342 PLCB3Q01970 1234 aa22.76■■□□□ 1.23
CBWD3-202ENST00000377342 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.76■■□□□ 1.23
CBWD3-202ENST00000377342 GPIHBP1Q8IV16 184 aa22.76■■□□□ 1.23
CBWD3-202ENST00000377342 HERC2P3Q9BVR0 1158 aa22.76■■□□□ 1.23
CBWD3-202ENST00000377342 COLQQ9Y215 455 aaPredicted RBP22.76■■□□□ 1.23
CBWD3-202ENST00000377342 SOD2P04179 222 aa22.75■■□□□ 1.23
CBWD3-202ENST00000377342 DNAJB2P25686 324 aa22.75■■□□□ 1.23
CBWD3-202ENST00000377342 SMAD3P84022 425 aaKnown RBP22.75■■□□□ 1.23
CBWD3-202ENST00000377342 DDX53Q86TM3 631 aaKnown RBP22.75■■□□□ 1.23
CBWD3-202ENST00000377342 DRC7Q8IY82 874 aa22.75■■□□□ 1.23
CBWD3-202ENST00000377342 FAM71AQ8IYT1 594 aa22.75■■□□□ 1.23
CBWD3-202ENST00000377342 SPAG5Q96R06 1193 aa22.75■■□□□ 1.23
CBWD3-202ENST00000377342 TGS1Q96RS0 853 aaKnown RBP22.75■■□□□ 1.23
CBWD3-202ENST00000377342 PLVAPQ9BX97 442 aa22.75■■□□□ 1.23
CBWD3-202ENST00000377342 ELOVL4Q9GZR5 314 aa22.75■■□□□ 1.23
CBWD3-202ENST00000377342 FAM124BQ9H5Z6 455 aaPredicted RBP22.75■■□□□ 1.23
CBWD3-202ENST00000377342 MSRAQ9UJ68 235 aa22.75■■□□□ 1.23
CBWD3-202ENST00000377342 BARX2Q9UMQ3 279 aaPredicted RBP22.75■■□□□ 1.23
CBWD3-202ENST00000377342 PTPRDP23468 1912 aa22.75■■□□□ 1.23
CBWD3-202ENST00000377342 A0A1W2PPC1 479 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 LMO2P25791 158 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 NDST1P52848 882 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 ZBED6P86452 979 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 ORC1Q13415 861 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 VARS2Q5ST30 1063 aaKnown RBP22.74■■□□□ 1.23
CBWD3-202ENST00000377342 TMEM270Q6UE05 265 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 PPFIBP1Q86W92 1011 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 TC2NQ8N9U0 490 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 SPATA18Q8TC71 538 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 CHST7Q9NS84 486 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 DSEQ9UL01 958 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 MYO6Q9UM54 1294 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 STXBP5LQ9Y2K9 1186 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 LUC7L2Q9Y383 392 aaKnown RBP22.74■■□□□ 1.23
CBWD3-202ENST00000377342 PCDHB4Q9Y5E5 795 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 ARHGEF37A1IGU5 675 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 FAM163BP0C2L3 166 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 SOX5P35711 763 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 YWHAEP62258 255 aaKnown RBP22.74■■□□□ 1.23
CBWD3-202ENST00000377342 YWHAHQ04917 246 aaPredicted RBP22.74■■□□□ 1.23
CBWD3-202ENST00000377342 MRPL58Q14197 206 aaKnown RBP22.74■■□□□ 1.23
CBWD3-202ENST00000377342 ARID5BQ14865 1188 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 PPP2R2DQ66LE6 453 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 OVOS1Q6IE37 1185 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 RBBP8NLQ8NC74 664 aaPredicted RBP22.74■■□□□ 1.23
CBWD3-202ENST00000377342 SAMD11Q96NU1 681 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 TTPALQ9BTX7 342 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 IMPACTQ9P2X3 320 aa22.74■■□□□ 1.23
CBWD3-202ENST00000377342 OAZ2O95190 189 aa22.73■■□□□ 1.23
CBWD3-202ENST00000377342 KRT5P13647 590 aa22.73■■□□□ 1.23
CBWD3-202ENST00000377342 KRT9P35527 623 aa22.73■■□□□ 1.23
CBWD3-202ENST00000377342 RAD23BP54727 409 aa22.73■■□□□ 1.23
CBWD3-202ENST00000377342 ADKP55263 362 aaKnown RBP22.73■■□□□ 1.23
CBWD3-202ENST00000377342 USP41Q3LFD5 358 aa22.73■■□□□ 1.23
CBWD3-202ENST00000377342 KIAA0319Q5VV43 1072 aa22.73■■□□□ 1.23
CBWD3-202ENST00000377342 CEP57Q86XR8 500 aa22.73■■□□□ 1.23
CBWD3-202ENST00000377342 OR6B3Q8NGW1 331 aa22.73■■□□□ 1.23
CBWD3-202ENST00000377342 OR10T2Q8NGX3 314 aa22.73■■□□□ 1.23
CBWD3-202ENST00000377342 DNAJC7Q99615 494 aa22.73■■□□□ 1.23
CBWD3-202ENST00000377342 DPEP3Q9H4B8 488 aa22.73■■□□□ 1.23
CBWD3-202ENST00000377342 ACP6Q9NPH0 428 aa22.73■■□□□ 1.23
CBWD3-202ENST00000377342 DDX43Q9NXZ2 648 aaKnown RBP22.73■■□□□ 1.23
CBWD3-202ENST00000377342 GFPT2O94808 682 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 CALCAP01258 141 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 ACAT1P24752 427 aaKnown RBP22.72■■□□□ 1.23
CBWD3-202ENST00000377342 DNAJB1P25685 340 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 STAT1P42224 750 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 CCDC142Q17RM4 750 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 LRIT3Q3SXY7 679 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 ZNF394Q53GI3 561 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 PRPF38BQ5VTL8 546 aaKnown RBP22.72■■□□□ 1.23
CBWD3-202ENST00000377342 UNC93AQ86WB7 457 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 METTL23Q86XA0 190 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 VPS52Q8N1B4 723 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 TTC39CQ8N584 583 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 SLC4A11Q8NBS3 891 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 ANP32BQ92688 251 aaKnown RBP22.72■■□□□ 1.23
CBWD3-202ENST00000377342 TIFAQ96CG3 184 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 ZBP1Q9H171 429 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 SNX25Q9H3E2 840 aa22.72■■□□□ 1.23
CBWD3-202ENST00000377342 ALG13Q9NP73 1137 aaKnown RBP22.72■■□□□ 1.23
CBWD3-202ENST00000377342 AKR1B15C9JRZ8 316 aaPredicted RBP22.71■■□□□ 1.23
CBWD3-202ENST00000377342 CYP26A1O43174 497 aa22.71■■□□□ 1.23
CBWD3-202ENST00000377342 RB1P06400 928 aa22.71■■□□□ 1.23
CBWD3-202ENST00000377342 CLCN1P35523 988 aa22.71■■□□□ 1.23
CBWD3-202ENST00000377342 GNL1P36915 607 aaPredicted RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms