RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 CYP24A1Q07973 514 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 SEPT8Q92599 483 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 DCUN1D1Q96GG9 259 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 ABI2Q9NYB9 513 aaPredicted RBP18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 A0A087WZ62 844 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 INSRRP14616 1297 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 ATICP31939 592 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 VSNL1P62760 191 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 FASTKD1Q53R41 847 aaKnown RBP18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 FDXACB1Q9BRP7 624 aaPredicted RBP18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 TRIM15Q9C019 465 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 MUC3BQ9H195 1237 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 STARD7Q9NQZ5 370 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 ZC3H7BQ9UGR2 993 aaKnown RBP18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 LUC7L3O95232 432 aaKnown RBP18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 FGFR4P22455 802 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 C10orf120Q5SQS8 335 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 OTOP1Q7RTM1 612 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 CHSY1Q86X52 802 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 ANKMY2Q8IV38 441 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 CYP3A43Q9HB55 503 aa18.74■□□□□ 0.59
CLSTN1-202ENST00000377298 RBP3P10745 1247 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 LY6KQ17RY6 165 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 TRIM51Q9BSJ1 452 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 RANBP17Q9H2T7 1088 aaKnown RBP18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 LRRC4BQ9NT99 713 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 DSEQ9UL01 958 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 DISP2A7MBM2 1401 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 GMNCA6NCL1 334 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 FAM86B1E9PN63 330 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 DNAJC6O75061 913 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 FAM86B2P0C5J1 330 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 SPIRE2Q8WWL2 714 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 MTG1Q9BT17 334 aaPredicted RBP18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 CARD9Q9H257 536 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 NEU2Q9Y3R4 380 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 ANKRD65E5RJM6 399 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 AP1G2O75843 785 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 THP07101 528 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 CYP4A22Q5TCH4 519 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 USP33Q8TEY7 942 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 GTPBP10A4D1E9 387 aaKnown RBP18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 SPAG6O75602 509 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 DDX53Q86TM3 631 aaKnown RBP18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 GPRC5DQ9NZD1 345 aa18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 XPO7Q9UIA9 1087 aaKnown RBP18.73■□□□□ 0.59
CLSTN1-202ENST00000377298 ADORA2AP29274 412 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 JAMLQ86YT9 394 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 CLMNQ96JQ2 1002 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 TGS1Q96RS0 853 aaKnown RBP18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 CYB561D2O14569 222 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 CYP3A4P08684 503 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 GZMAP12544 262 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 PPIL2Q13356 520 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 KDELC2Q7Z4H8 507 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 ATP6V0D2Q8N8Y2 350 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 REPS2Q8NFH8 660 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 ZNF212Q9UDV6 495 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 ZNF197O14709 1029 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 CDH16O75309 829 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 ESRRBO95718 433 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 AKR1A1P14550 325 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 SERPINB9P50453 376 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 GRIK4Q16099 956 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 HIBCHQ6NVY1 386 aaPredicted RBP18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 THAP2Q9H0W7 228 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 AKAP3O75969 853 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 SLITRK3O94933 977 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 ARHGAP15Q53QZ3 475 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 RNF135Q8IUD6 432 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 CYP2W1Q8TAV3 490 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 THOC1Q96FV9 657 aaKnown RBP18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 CAMTA1Q9Y6Y1 1673 aa18.72■□□□□ 0.59
CLSTN1-202ENST00000377298 SGPL1O95470 568 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 AGTP01019 485 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 LRG1P02750 347 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 MCF2P10911 925 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 CYP11B1P15538 503 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 PSMC6P62333 389 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 ERVK-9P63128 1117 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 ERVK-24P63145 666 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 E2F4Q16254 413 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 USP38Q8NB14 1042 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 RBM12Q9NTZ6 932 aaKnown RBP18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 ANGPTL2Q9UKU9 493 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 F9P00740 461 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 ARFIP2P53365 341 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 MORF4L2Q15014 288 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 E2F5Q15329 346 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 TAF2Q6P1X5 1199 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 TPCN2Q8NHX9 752 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 TSPAN17Q96FV3 270 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 MLXIPLQ9NP71 852 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 SETD4Q9NVD3 440 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 PSTPIP1O43586 416 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 ZNF286BP0CG31 522 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 ACO1P21399 889 aaKnown RBP18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 TMEM119Q4V9L6 283 aa18.71■□□□□ 0.59
CLSTN1-202ENST00000377298 BEND6Q5SZJ8 279 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms