RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 ABHD15Q6UXT9 468 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 MON1BQ7L1V2 547 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 PALM2Q8IXS6 379 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 PPP1R13LQ8WUF5 828 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 SMC6Q96SB8 1091 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 TRABDQ9H4I3 376 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 KIAA1586Q9HCI6 787 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 GINM1Q9NU53 330 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 GGA3Q9NZ52 723 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 IP6K2Q9UHH9 426 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 LOC102724159A0A0B4J2E5 919 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 CST8O60676 142 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 MTA2O94776 668 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 MYBL1P10243 752 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 GCLCP48506 637 aaPredicted RBP13.65□□□□□ -0.22
USP11-204ENST00000377107 PSMC1P62191 440 aaKnown RBP13.65□□□□□ -0.22
USP11-204ENST00000377107 IL9RQ01113 521 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 OVGP1Q12889 678 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 PWP2Q15269 919 aaKnown RBP13.65□□□□□ -0.22
USP11-204ENST00000377107 FOCADQ5VW36 1801 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 CTAGE3PQ8IX95 158 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 ROPN1BQ9BZX4 212 aaPredicted RBP13.65□□□□□ -0.22
USP11-204ENST00000377107 ROPN1Q9HAT0 212 aaPredicted RBP13.65□□□□□ -0.22
USP11-204ENST00000377107 ZNF214Q9UL59 606 aaPredicted RBP13.65□□□□□ -0.22
USP11-204ENST00000377107 H0YCG3 227 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 MAPK13O15264 365 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 PAEPP09466 180 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 ATP4AP20648 1035 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 CDC25CP30307 473 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 NAA25Q14CX7 972 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 ZNF568Q3ZCX4 644 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 SUGP1Q8IWZ8 645 aaKnown RBP13.65□□□□□ -0.22
USP11-204ENST00000377107 KCTD6Q8NC69 237 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 PYROXD1Q8WU10 500 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 CFAP57Q96MR6 1250 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 C17orf75Q9HAS0 396 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 ETNK1Q9HBU6 452 aa13.65□□□□□ -0.22
USP11-204ENST00000377107 BHMG1C9JSJ3 638 aaPredicted RBP13.64□□□□□ -0.23
USP11-204ENST00000377107 CENPCQ03188 943 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 CAPSQ13938 189 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 EFTUD2Q15029 972 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■■■■ 27.5
USP11-204ENST00000377107 CCNG2Q16589 344 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 CRELD2Q6UXH1 353 aaPredicted RBP13.64□□□□□ -0.23
USP11-204ENST00000377107 UBA3Q8TBC4 463 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 N4BP2L2Q92802 583 aaPredicted RBP13.64□□□□□ -0.23
USP11-204ENST00000377107 FBXL18Q96ME1 805 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 NOD2Q9HC29 1040 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 IKBKGQ9Y6K9 419 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 RASSF9O75901 435 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 CLCN3P51790 818 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 IRX3P78415 501 aaPredicted RBP13.64□□□□□ -0.23
USP11-204ENST00000377107 ELF3P78545 371 aaPredicted RBP13.64□□□□□ -0.23
USP11-204ENST00000377107 SETDB1Q15047 1291 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 MAPK6Q16659 721 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 FAXCQ5TGI0 409 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 LRRC8CQ8TDW0 803 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 RMDN2Q96LZ7 410 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 NTPCRQ9BSD7 190 aaKnown RBP13.64□□□□□ -0.23
USP11-204ENST00000377107 KDM4CQ9H3R0 1056 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 KAT6AQ92794 2004 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 A0A1W2PPM1 405 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 B4GALT5O43286 388 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 KRT3P12035 628 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 IVDP26440 423 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 RFC1P35251 1148 aaPredicted RBP13.64□□□□□ -0.23
USP11-204ENST00000377107 ATP11AP98196 1134 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 ACTL9Q8TC94 416 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 RBM41Q96IZ5 413 aaKnown RBP13.64□□□□□ -0.23
USP11-204ENST00000377107 TMEM237Q96Q45 408 aa13.64□□□□□ -0.23
USP11-204ENST00000377107 MAK16Q9BXY0 300 aaKnown RBP13.64□□□□□ -0.23
USP11-204ENST00000377107 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.64□□□□□ -0.23
USP11-204ENST00000377107 C5orf60A6NFR6 353 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 H0Y3Z8 333 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 ASAP2O43150 1006 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 LDHAP00338 332 aaKnown RBP13.63□□□□□ -0.23
USP11-204ENST00000377107 PRKCBP05771 671 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 TBXAS1P24557 533 aaPredicted RBP13.63□□□□□ -0.23
USP11-204ENST00000377107 YWHAGP61981 247 aaKnown RBP eCLIP13.63□□□□□ -0.23
USP11-204ENST00000377107 DUOXA2Q1HG44 320 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 SPOCD1Q6ZMY3 1216 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 ZBTB8OSQ8IWT0 167 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 FAM71DQ8N9W8 422 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 TFAP2BQ92481 460 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 CENPTQ96BT3 561 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 CGRRF1Q99675 332 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 PORCNQ9H237 461 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 AVENQ9NQS1 362 aaPredicted RBP13.63□□□□□ -0.23
USP11-204ENST00000377107 HOXC10Q9NYD6 342 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 HEY1Q9Y5J3 304 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 ATP8B3O60423 1300 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 COL11A2P13942 1736 aaPredicted RBP13.63□□□□□ -0.23
USP11-204ENST00000377107 TNNC2P02585 160 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 UBA1P22314 1058 aaKnown RBP13.63□□□□□ -0.23
USP11-204ENST00000377107 OTUD4Q01804 1114 aaKnown RBP13.63□□□□□ -0.23
USP11-204ENST00000377107 OGDHQ02218 1023 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 C1orf228Q6PIY5 440 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 EXD1Q8NHP7 514 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.63□□□□□ -0.23
USP11-204ENST00000377107 COPS5Q92905 334 aa13.63□□□□□ -0.23
USP11-204ENST00000377107 ERP27Q96DN0 273 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms