RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 VCPIP1Q96JH7 1222 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 PLVAPQ9BX97 442 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 INO80BQ9C086 356 aaPredicted RBP14.82□□□□□ -0.04
MSH5-202ENST00000375740 FZD8Q9H461 694 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 PTPRHQ9HD43 1115 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 C5orf60A6NFR6 353 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 ACKR2O00590 384 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 PROZP22891 400 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 SLC26A2P50443 739 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 TFAMQ00059 246 aaKnown RBP14.82□□□□□ -0.04
MSH5-202ENST00000375740 TFDP1Q14186 410 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 SGSM1Q2NKQ1 1148 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 ATF7IP2Q5U623 682 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 EEF1DP3Q658K8 133 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 MPZL3Q6UWV2 235 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 C12orf50Q8NA57 414 aaPredicted RBP14.82□□□□□ -0.04
MSH5-202ENST00000375740 DDX27Q96GQ7 796 aaKnown RBP14.82□□□□□ -0.04
MSH5-202ENST00000375740 LRRC19Q9H756 370 aa14.82□□□□□ -0.04
MSH5-202ENST00000375740 MRPL47Q9HD33 250 aaKnown RBP14.82□□□□□ -0.04
MSH5-202ENST00000375740 SRRM3A6NNA2 597 aaPredicted RBP14.81□□□□□ -0.04
MSH5-202ENST00000375740 GJB6O95452 261 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 TRPC3Q13507 836 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 SURF1Q15526 300 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 TMEM132AQ24JP5 1023 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 ZNF394Q53GI3 561 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 GJC2Q5T442 439 aaPredicted RBP14.81□□□□□ -0.04
MSH5-202ENST00000375740 PLEKHA7Q6IQ23 1121 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 CPLX4Q7Z7G2 160 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 ARFGAP2Q8N6H7 521 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 MAB21L3Q8N8X9 362 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 HERPUD2Q9BSE4 406 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 MINDY3Q9H8M7 445 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.81□□□□□ -0.04
MSH5-202ENST00000375740 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.81□□□□□ -0.04
MSH5-202ENST00000375740 ASB14A6NK59 587 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 O00370 1275 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 HOXC6P09630 235 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 DRD4P21917 467 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 MAGOHP61326 146 aaKnown RBP14.81□□□□□ -0.04
MSH5-202ENST00000375740 PPP2R2AP63151 447 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 IGBP1P78318 339 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 C1QBPQ07021 282 aaKnown RBP14.81□□□□□ -0.04
MSH5-202ENST00000375740 SNX1Q13596 522 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 ZNF568Q3ZCX4 644 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 PNMA8AQ86V59 439 aaPredicted RBP14.81□□□□□ -0.04
MSH5-202ENST00000375740 CEP120Q8N960 986 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 RUNDC3BQ96NL0 473 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 SYT17Q9BSW7 474 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 CISHQ9NSE2 258 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.81□□□□□ -0.04
MSH5-202ENST00000375740 EVPLQ92817 2033 aa14.81□□□□□ -0.04
MSH5-202ENST00000375740 DNAJC8O75937 253 aaPredicted RBP14.8□□□□□ -0.04
MSH5-202ENST00000375740 ANP32DO95626 131 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 WEE2P0C1S8 567 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 TAS2R40P59535 323 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 IRX1P78414 480 aaPredicted RBP14.8□□□□□ -0.04
MSH5-202ENST00000375740 SNAPC2Q13487 334 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 SGO2Q562F6 1265 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 EAPPQ56P03 285 aaPredicted RBP14.8□□□□□ -0.04
MSH5-202ENST00000375740 GKAP1Q5VSY0 366 aaPredicted RBP14.8□□□□□ -0.04
MSH5-202ENST00000375740 RUFY4Q6ZNE9 571 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 ARMCX2Q7L311 632 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 TBC1D1Q86TI0 1168 aaPredicted RBP14.8□□□□□ -0.04
MSH5-202ENST00000375740 SHCBP1Q8NEM2 672 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 SLC10A4Q96EP9 437 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 L3MBTL3Q96JM7 780 aaPredicted RBP14.8□□□□□ -0.04
MSH5-202ENST00000375740 NIF3L1Q9GZT8 377 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 USTQ9Y2C2 406 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 ENO4A6NNW6 628 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 TLR3O15455 904 aaKnown RBP14.8□□□□□ -0.04
MSH5-202ENST00000375740 UPP2O95045 317 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 IQCF3P0C7M6 154 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 TMEM191BP0C7N4 346 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 PMS2P54278 862 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 SARNPP82979 210 aaKnown RBP14.8□□□□□ -0.04
MSH5-202ENST00000375740 MBTD1Q05BQ5 628 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 LDLRAD1Q5T700 205 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 BZW1Q7L1Q6 419 aaKnown RBP14.8□□□□□ -0.04
MSH5-202ENST00000375740 TMEM192Q8IY95 271 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 FEZF2Q8TBJ5 459 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 RSRC1Q96IZ7 334 aaKnown RBP14.8□□□□□ -0.04
MSH5-202ENST00000375740 EPB41L4BQ9H329 900 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 EBF2Q9HAK2 575 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 CHST7Q9NS84 486 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 ERAP1Q9NZ08 941 aa14.8□□□□□ -0.04
MSH5-202ENST00000375740 EIF4E1BA6NMX2 242 aaKnown RBP14.79□□□□□ -0.04
MSH5-202ENST00000375740 ASAP2O43150 1006 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 C22orf31O95567 290 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 ECEL1O95672 775 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 MMP8P22894 467 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 ARHGAP1Q07960 439 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 IFFO1Q0D2I5 559 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 SPDYCQ5MJ68 293 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.79□□□□□ -0.04
MSH5-202ENST00000375740 PARVAQ9NVD7 372 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 PARP2Q9UGN5 583 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 SCINQ9Y6U3 715 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 PASKQ96RG2 1323 aa14.79□□□□□ -0.04
MSH5-202ENST00000375740 CSDE1O75534 798 aaKnown RBP14.79□□□□□ -0.04
MSH5-202ENST00000375740 INSRRP14616 1297 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms