RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 RAB3GAP1Q15042 981 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 Q3ZCU0 254 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 SUPT20HL1Q3ZLR7 823 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 CFAP221Q4G0U5 840 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 FBXO48Q5FWF7 155 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 PCNX4Q63HM2 1172 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 ZNF783Q6ZMS7 281 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 AGMOQ6ZNB7 445 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 PPP1R36Q96LQ0 422 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 DMRTB1Q96MA1 342 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 GORASP2Q9H8Y8 452 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 LRFN1Q9P244 771 aa9.56□□□□□ -0.88
UBR4-201ENST00000375218 BPTFQ12830 3046 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 CCDC78A2IDD5 438 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 RRP8O43159 456 aaKnown RBP9.55□□□□□ -0.88
UBR4-201ENST00000375218 ENDOD1O94919 500 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 FGFR1P11362 822 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 CPA1P15085 419 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 CRKP46108 304 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 EVX2Q03828 476 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 ACTN3Q08043 901 aaPredicted RBP9.55□□□□□ -0.88
UBR4-201ENST00000375218 LRRC24Q50LG9 513 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 SYT10Q6XYQ8 523 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 MTDHQ86UE4 582 aaKnown RBP9.55□□□□□ -0.88
UBR4-201ENST00000375218 ZBTB34Q8NCN2 500 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 ARRDC4Q8NCT1 418 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 PNMA1Q8ND90 353 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 ANKS1AQ92625 1134 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 GTF3C6Q969F1 213 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 ACO2Q99798 780 aaKnown RBP9.55□□□□□ -0.88
UBR4-201ENST00000375218 TRIM62Q9BVG3 475 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 NT5C3AQ9H0P0 336 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 IL1RAPL2Q9NP60 686 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 ACTR3BQ9P1U1 418 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 TUBGCP4Q9UGJ1 667 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 ZDHHC9Q9Y397 364 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.55□□□□□ -0.88
UBR4-201ENST00000375218 GHRP10912 638 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 DNM1Q05193 864 aaKnown RBP9.55□□□□□ -0.88
UBR4-201ENST00000375218 CRYMQ14894 314 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 FOXB2Q5VYV0 432 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 IL27RAQ6UWB1 636 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 PALM2Q8IXS6 379 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 SCYL3Q8IZE3 742 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 SAAL1Q96ER3 474 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 BBS2Q9BXC9 721 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 GHITMQ9H3K2 345 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 CARMIL3Q8ND23 1372 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 ABCC12Q96J65 1359 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 OR6C74A6NCV1 312 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 CHURC1-FNTBB4DL54 471 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 HNRNPRO43390 633 aaKnown RBP9.55□□□□□ -0.88
UBR4-201ENST00000375218 LPOP22079 712 aaPredicted RBP9.55□□□□□ -0.88
UBR4-201ENST00000375218 SLC8A3P57103 927 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 CDH26Q8IXH8 852 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 GALNT12Q8IXK2 581 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 ALS2CR12Q96Q35 445 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 C8orf4Q9NR00 106 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 PPP1R14DQ9NXH3 145 aa9.55□□□□□ -0.88
UBR4-201ENST00000375218 C15orf38-AP3S2A0A0A6YYH1 394 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 CFAP99D6REC4 459 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 H0YAE9 185 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 PNMA6AP0CW24 399 aaPredicted RBP9.54□□□□□ -0.88
UBR4-201ENST00000375218 UBL4AP11441 157 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 PORP16435 677 aaPredicted RBP9.54□□□□□ -0.88
UBR4-201ENST00000375218 ALOX12P18054 663 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 U2AF2P26368 475 aaKnown RBP eCLIP9.54□□□□□ -0.881e-6■□□□□ 9.6
UBR4-201ENST00000375218 NOS3P29474 1203 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 TNFAIP2Q03169 654 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 IQSEC1Q6DN90 963 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 PACS2Q86VP3 889 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 CEP57Q86XR8 500 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 COL23A1Q86Y22 540 aaPredicted RBP9.54□□□□□ -0.88
UBR4-201ENST00000375218 PHC2Q8IXK0 858 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 SPDYE1Q8NFV5 336 aaPredicted RBP9.54□□□□□ -0.88
UBR4-201ENST00000375218 ACSBG1Q96GR2 724 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 USP26Q9BXU7 913 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 DBNLQ9UJU6 430 aaKnown RBP9.54□□□□□ -0.88
UBR4-201ENST00000375218 ASAP2O43150 1006 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 TATP17735 454 aaPredicted RBP9.54□□□□□ -0.88
UBR4-201ENST00000375218 MCM4P33991 863 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 HTR2BP41595 481 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 TPM4P67936 248 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 SNCBQ16143 134 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 SGO1Q5FBB7 561 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 ZCCHC12Q6PEW1 402 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 ZYG11AQ6WRX3 759 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 ZNF296Q8WUU4 475 aaPredicted RBP9.54□□□□□ -0.88
UBR4-201ENST00000375218 SYN2Q92777 582 aaPredicted RBP9.54□□□□□ -0.88
UBR4-201ENST00000375218 GDAP1L1Q96MZ0 367 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 CCSER1Q9C0I3 900 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 SCPEP1Q9HB40 452 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 FLT1P17948 1338 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 LAMB1P07942 1786 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 PRDM1O75626 825 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 FBXO21O94952 628 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 CAMTA2O94983 1202 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 USP17L7P0C7H9 530 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 TM4SF4P48230 202 aa9.54□□□□□ -0.88
UBR4-201ENST00000375218 CCDC14Q49A88 953 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms