RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 RASA2Q15283 850 aa21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 SEPT7Q16181 437 aaKnown RBP21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 MDH1BQ5I0G3 518 aa21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 C8orf37Q96NL8 207 aa21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 CDK5RAP2Q96SN8 1893 aa21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 BTAF1O14981 1849 aa21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 FRMPD2Q68DX3 1309 aaPredicted RBP21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 TM7SF2O76062 418 aa21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 DLDP09622 509 aaKnown RBP21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 PSMC2P35998 433 aaKnown RBP21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 PDK3Q15120 406 aa21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 TRAPPC3LQ5T215 181 aa21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 C15orf52Q6ZUT6 534 aaKnown RBP21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 ALYREFQ86V81 257 aaKnown RBP21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 OXNAD1Q96HP4 312 aaPredicted RBP21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 BARX2Q9UMQ3 279 aaPredicted RBP21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 PLA2G4CQ9UP65 541 aa21.67■■□□□ 1.06
TMEFF1-201ENST00000374879 SMIM18P0DKX4 95 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 BCRP11274 1271 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 TMCO4Q5TGY1 634 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 SYDE2Q5VT97 1194 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 RNF111Q6ZNA4 994 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 TREML1Q86YW5 311 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 SMYD1Q8NB12 490 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 SHKBP1Q8TBC3 707 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 TCP10LQ8TDR4 215 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 RPGRQ92834 1020 aaKnown RBP21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 SLC17A7Q9P2U7 560 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 TDRKHQ9Y2W6 561 aaKnown RBP21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 TULP1O00294 542 aaPredicted RBP21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 SMARCA1P28370 1054 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 MAN1A1P33908 653 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 CHN2P52757 468 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 RHBDL3P58872 404 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 MFSD14BQ5SR56 506 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 C1orf228Q6PIY5 440 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 ISLR2Q6UXK2 745 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 CEP70Q8NHQ1 597 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 FAM172AQ8WUF8 416 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 NGLY1Q96IV0 654 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 VPS37BQ9H9H4 285 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 BTBD7Q9P203 1132 aa21.66■■□□□ 1.06
TMEFF1-201ENST00000374879 MYL2P10916 166 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 MMEL1Q495T6 779 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 UGT2A3Q6UWM9 527 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 ZCCHC9Q8N567 271 aaKnown RBP21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 DIS3LQ8TF46 1054 aaKnown RBP21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 PYDC1Q8WXC3 89 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 MTBPQ96DY7 904 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 PHF12Q96QT6 1004 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 GPAMQ9HCL2 828 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 INIPQ9NRY2 104 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 ZNF711Q9Y462 761 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 TXNDC9O14530 226 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 TFAP2AP05549 437 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 VPS72Q15906 364 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 MEX3CQ5U5Q3 659 aaKnown RBP21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 NCCRP1Q6ZVX7 275 aaPredicted RBP21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 ANKS1BQ7Z6G8 1248 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 DNAJC5Q9H3Z4 198 aa21.65■■□□□ 1.06
TMEFF1-201ENST00000374879 SFI1A8K8P3 1242 aa21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 BOLA2-SMG1P6H3BVE0 249 aa21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 GOLGA8RI6L899 631 aa21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 GEMIN4P57678 1058 aaKnown RBP21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 PHEXP78562 749 aa21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 KDSRQ06136 332 aa21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 DCTN2Q13561 401 aaKnown RBP21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 BTG3Q14201 252 aaPredicted RBP21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 COG2Q14746 738 aa21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 BMT2Q1RMZ1 405 aa21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 SLC44A4Q53GD3 710 aa21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 LRRC43Q8N309 656 aa21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 HSPBAP1Q96EW2 488 aa21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 PLVAPQ9BX97 442 aa21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 HEMGNQ9BXL5 484 aa21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 RIOX1Q9H6W3 641 aa21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 UBE2TQ9NPD8 197 aaPredicted RBP21.64■■□□□ 1.06
TMEFF1-201ENST00000374879 NCOA4Q13772 614 aa21.64■■□□□ 1.05
TMEFF1-201ENST00000374879 FBXL19Q6PCT2 694 aa21.64■■□□□ 1.05
TMEFF1-201ENST00000374879 TRIM67Q6ZTA4 783 aa21.64■■□□□ 1.05
TMEFF1-201ENST00000374879 DHDDSQ86SQ9 333 aa21.64■■□□□ 1.05
TMEFF1-201ENST00000374879 METTL25Q8N6Q8 603 aa21.64■■□□□ 1.05
TMEFF1-201ENST00000374879 CCDC89Q8N998 374 aa21.64■■□□□ 1.05
TMEFF1-201ENST00000374879 BBOF1Q8ND07 529 aa21.64■■□□□ 1.05
TMEFF1-201ENST00000374879 KLF6Q99612 283 aaPredicted RBP21.64■■□□□ 1.05
TMEFF1-201ENST00000374879 SIKE1Q9BRV8 207 aa21.64■■□□□ 1.05
TMEFF1-201ENST00000374879 RANBP17Q9H2T7 1088 aaKnown RBP21.64■■□□□ 1.05
TMEFF1-201ENST00000374879 S100A14Q9HCY8 104 aa21.64■■□□□ 1.05
TMEFF1-201ENST00000374879 FAM237BA0A1B0GVD1 139 aa21.63■■□□□ 1.05
TMEFF1-201ENST00000374879 PIAS1O75925 651 aa21.63■■□□□ 1.05
TMEFF1-201ENST00000374879 GYS1P13807 737 aa21.63■■□□□ 1.05
TMEFF1-201ENST00000374879 IL1R1P14778 569 aa21.63■■□□□ 1.05
TMEFF1-201ENST00000374879 DLGAP5Q15398 846 aa21.63■■□□□ 1.05
TMEFF1-201ENST00000374879 NLRX1Q86UT6 975 aa21.63■■□□□ 1.05
TMEFF1-201ENST00000374879 CATSPER3Q86XQ3 398 aa21.63■■□□□ 1.05
TMEFF1-201ENST00000374879 GGA1Q9UJY5 639 aa21.63■■□□□ 1.05
TMEFF1-201ENST00000374879 ADAMTS6Q9UKP5 1117 aa21.63■■□□□ 1.05
TMEFF1-201ENST00000374879 SGPL1O95470 568 aa21.63■■□□□ 1.05
TMEFF1-201ENST00000374879 ZNF24P17028 368 aa21.63■■□□□ 1.05
TMEFF1-201ENST00000374879 PCSK6P29122 969 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms