RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 CACNG4Q9UBN1 327 aa18.76■□□□□ 0.59
PFDN6-201ENST00000374606 NXF1Q9UBU9 619 aaKnown RBP18.76■□□□□ 0.59
PFDN6-201ENST00000374606 NLRC5Q86WI3 1866 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 SCN1AP35498 2009 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 C19orf67A6NJJ6 358 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 LRRC53A6NM62 1247 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 RNF225M0QZC1 329 aaPredicted RBP18.75■□□□□ 0.59
PFDN6-201ENST00000374606 ADKP55263 362 aaKnown RBP18.75■□□□□ 0.59
PFDN6-201ENST00000374606 WDR72Q3MJ13 1102 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 PAN2Q504Q3 1202 aaKnown RBP18.75■□□□□ 0.59
PFDN6-201ENST00000374606 PDXDC1Q6P996 788 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 SCARA5Q6ZMJ2 495 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 ADHFE1Q8IWW8 467 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 KAT5Q92993 513 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 FAXDC2Q96IV6 333 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 KREMEN1Q96MU8 473 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 STK33Q9BYT3 514 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 NUCKS1Q9H1E3 243 aaKnown RBP18.75■□□□□ 0.59
PFDN6-201ENST00000374606 ABHD10Q9NUJ1 306 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 MYO6Q9UM54 1294 aa18.75■□□□□ 0.59
PFDN6-201ENST00000374606 MYO7AQ13402 2215 aa18.74■□□□□ 0.59
PFDN6-201ENST00000374606 F8VZ95 297 aa18.74■□□□□ 0.59
PFDN6-201ENST00000374606 DDHD2O94830 711 aa18.74■□□□□ 0.59
PFDN6-201ENST00000374606 ASPAP45381 313 aa18.74■□□□□ 0.59
PFDN6-201ENST00000374606 JAM2P57087 298 aa18.74■□□□□ 0.59
PFDN6-201ENST00000374606 YWHAEP62258 255 aaKnown RBP18.74■□□□□ 0.59
PFDN6-201ENST00000374606 DRAP1Q14919 205 aaPredicted RBP18.74■□□□□ 0.59
PFDN6-201ENST00000374606 UPP1Q16831 310 aa18.74■□□□□ 0.59
PFDN6-201ENST00000374606 TSR1Q2NL82 804 aaKnown RBP18.74■□□□□ 0.59
PFDN6-201ENST00000374606 ZNF280BQ86YH2 543 aa18.74■□□□□ 0.59
PFDN6-201ENST00000374606 COLGALT2Q8IYK4 626 aa18.74■□□□□ 0.59
PFDN6-201ENST00000374606 TC2NQ8N9U0 490 aa18.74■□□□□ 0.59
PFDN6-201ENST00000374606 OR8K1Q8NGG5 319 aa18.74■□□□□ 0.59
PFDN6-201ENST00000374606 ARID3AQ99856 593 aa18.74■□□□□ 0.59
PFDN6-201ENST00000374606 CLDND1Q9NY35 253 aa18.74■□□□□ 0.59
PFDN6-201ENST00000374606 POLIQ9UNA4 740 aa18.74■□□□□ 0.59
PFDN6-201ENST00000374606 KPNA7A9QM74 516 aa18.73■□□□□ 0.59
PFDN6-201ENST00000374606 NCK2O43639 380 aa18.73■□□□□ 0.59
PFDN6-201ENST00000374606 B4GALT3O60512 393 aa18.73■□□□□ 0.59
PFDN6-201ENST00000374606 STAT1P42224 750 aa18.73■□□□□ 0.59
PFDN6-201ENST00000374606 OR1G1P47890 313 aa18.73■□□□□ 0.59
PFDN6-201ENST00000374606 SFMBT2Q5VUG0 894 aa18.73■□□□□ 0.59
PFDN6-201ENST00000374606 FMNL3Q8IVF7 1028 aa18.73■□□□□ 0.59
PFDN6-201ENST00000374606 CMTR2Q8IYT2 770 aaKnown RBP18.73■□□□□ 0.59
PFDN6-201ENST00000374606 JAKMIP2Q96AA8 810 aa18.73■□□□□ 0.59
PFDN6-201ENST00000374606 DNAJC7Q99615 494 aa18.73■□□□□ 0.59
PFDN6-201ENST00000374606 PAAF1Q9BRP4 392 aa18.73■□□□□ 0.59
PFDN6-201ENST00000374606 BCO2Q9BYV7 579 aa18.73■□□□□ 0.59
PFDN6-201ENST00000374606 NRDE2Q9H7Z3 1164 aa18.73■□□□□ 0.59
PFDN6-201ENST00000374606 RC3H2Q9HBD1 1191 aaKnown RBP18.73■□□□□ 0.59
PFDN6-201ENST00000374606 SNX9Q9Y5X1 595 aa18.73■□□□□ 0.59
PFDN6-201ENST00000374606 SPTLC1O15269 473 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 B3GAT3O94766 335 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 KIF4AO95239 1232 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 PAX3P23760 479 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 DEKP35659 375 aaKnown RBP18.72■□□□□ 0.59
PFDN6-201ENST00000374606 SOX5P35711 763 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 ARID5BQ14865 1188 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 ASIC2Q16515 512 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 DCLRE1AQ6PJP8 1040 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 HFE2Q6ZVN8 426 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 C3orf58Q8NDZ4 430 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 SHC3Q92529 594 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 RABGGTAQ92696 567 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 ZNF689Q96CS4 500 aaPredicted RBP18.72■□□□□ 0.59
PFDN6-201ENST00000374606 PANX2Q96RD6 677 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 MMS19Q96T76 1030 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 TMEM175Q9BSA9 504 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 GPR88Q9GZN0 384 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 SMYD3Q9H7B4 428 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 CYP3A43Q9HB55 503 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 ZNHIT6Q9NWK9 470 aaKnown RBP18.72■□□□□ 0.59
PFDN6-201ENST00000374606 GDAP2Q9NXN4 497 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 DNAJB4Q9UDY4 337 aa18.72■□□□□ 0.59
PFDN6-201ENST00000374606 PRG3Q9Y2Y8 225 aaPredicted RBP18.72■□□□□ 0.59
PFDN6-201ENST00000374606 TMEM189-UBE2V1I3L0A0 370 aa18.71■□□□□ 0.59
PFDN6-201ENST00000374606 NRDCO43847 1150 aa18.71■□□□□ 0.59
PFDN6-201ENST00000374606 PNMA6AP0CW24 399 aaPredicted RBP18.71■□□□□ 0.59
PFDN6-201ENST00000374606 CD58P19256 250 aa18.71■□□□□ 0.59
PFDN6-201ENST00000374606 IRS1P35568 1242 aa18.71■□□□□ 0.59
PFDN6-201ENST00000374606 USP8P40818 1118 aa18.71■□□□□ 0.59
PFDN6-201ENST00000374606 RAP1GAPP47736 663 aa18.71■□□□□ 0.59
PFDN6-201ENST00000374606 LILRA4P59901 499 aa18.71■□□□□ 0.59
PFDN6-201ENST00000374606 BTG3Q14201 252 aaPredicted RBP18.71■□□□□ 0.59
PFDN6-201ENST00000374606 SYN2Q92777 582 aaPredicted RBP18.71■□□□□ 0.59
PFDN6-201ENST00000374606 HCSTQ9UBK5 93 aa18.71■□□□□ 0.59
PFDN6-201ENST00000374606 GFPT2O94808 682 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 WEE2P0C1S8 567 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 CCDC172P0C7W6 258 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 KRT5P13647 590 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 FERP16591 822 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 ACO1P21399 889 aaKnown RBP18.7■□□□□ 0.58
PFDN6-201ENST00000374606 CTNNB1P35222 781 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 ARID5AQ03989 594 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 E4F1Q66K89 784 aaPredicted RBP18.7■□□□□ 0.58
PFDN6-201ENST00000374606 DSTYKQ6XUX3 929 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 GPIHBP1Q8IV16 184 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 TTC39CQ8N584 583 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 UBR7Q8N806 425 aa18.7■□□□□ 0.58
PFDN6-201ENST00000374606 HASPINQ8TF76 798 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms