RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 PIK3CAP42336 1068 aa17.94■□□□□ 0.46
PHF1-202ENST00000374516 CLCN3P51790 818 aa17.94■□□□□ 0.46
PHF1-202ENST00000374516 GTF2A2P52657 109 aa17.94■□□□□ 0.46
PHF1-202ENST00000374516 FMO1Q01740 532 aa17.94■□□□□ 0.46
PHF1-202ENST00000374516 GBP7Q8N8V2 638 aaPredicted RBP17.94■□□□□ 0.46
PHF1-202ENST00000374516 OR5B17Q8NGF7 314 aa17.94■□□□□ 0.46
PHF1-202ENST00000374516 VNN1O95497 513 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 COPS2P61201 443 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 ZNF792Q3KQV3 632 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 WDR44Q5JSH3 913 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 EFCAB12Q6NXP0 572 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 TAPT1Q6NXT6 567 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 CDR2LQ86X02 465 aaPredicted RBP17.93■□□□□ 0.46
PHF1-202ENST00000374516 CCDC105Q8IYK2 499 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 NOP53Q9NZM5 478 aaKnown RBP17.93■□□□□ 0.46
PHF1-202ENST00000374516 IGKV6-21A0A0C4DH24 114 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 TMEM110-MUSTN1A8MSY1 372 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 LDHAP00338 332 aaKnown RBP17.93■□□□□ 0.46
PHF1-202ENST00000374516 CCND1P24385 295 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 COILP38432 576 aaPredicted RBP17.93■□□□□ 0.46
PHF1-202ENST00000374516 ARHGAP1Q07960 439 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 MXD4Q14582 209 aaPredicted RBP17.93■□□□□ 0.46
PHF1-202ENST00000374516 ZNF568Q3ZCX4 644 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 MGARPQ8TDB4 240 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 KCNN1Q92952 543 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 KLHL29Q96CT2 875 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 RPS6KC1Q96S38 1066 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 PPP1R16BQ96T49 567 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 MRPL4Q9BYD3 311 aaKnown RBP17.93■□□□□ 0.46
PHF1-202ENST00000374516 PTPN22Q9Y2R2 807 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 SCN4AP35499 1836 aa17.93■□□□□ 0.46
PHF1-202ENST00000374516 TCRBV7S2A1N4TA0A589 114 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 TMEM120BA0PK00 339 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 PYGMP11217 842 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 COMTP21964 271 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 ADCYAP1R1P41586 468 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 EFNA5P52803 228 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 GCNT1Q02742 428 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 TCEAL1Q15170 157 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 MAPK6Q16659 721 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 CYP1B1Q16678 543 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 LONRF1Q17RB8 773 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 TRMT10CQ7L0Y3 403 aaKnown RBP17.92■□□□□ 0.46
PHF1-202ENST00000374516 CCDC25Q86WR0 208 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 ARHGEF2Q92974 986 aaKnown RBP17.92■□□□□ 0.46
PHF1-202ENST00000374516 GBA2Q9HCG7 927 aaPredicted RBP17.92■□□□□ 0.46
PHF1-202ENST00000374516 ARHGEF3Q9NR81 526 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 IVNS1ABPQ9Y6Y0 642 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 CNTNAP2Q9UHC6 1331 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 INO80B-WBP1J3KQ70 363 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 CSDE1O75534 798 aaKnown RBP17.92■□□□□ 0.46
PHF1-202ENST00000374516 TOM1L1O75674 476 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 PRKCBP05771 671 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 CREB1P16220 341 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 GPC5P78333 572 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 CDR2Q01850 454 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 SEL1L2Q5TEA6 688 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 NUGGCQ68CJ6 796 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 ZPBP2Q6X784 338 aa17.92■□□□□ 0.46
PHF1-202ENST00000374516 DDX1Q92499 740 aaKnown RBP17.92■□□□□ 0.46
PHF1-202ENST00000374516 ACO2Q99798 780 aaKnown RBP17.92■□□□□ 0.46
PHF1-202ENST00000374516 INO80BQ9C086 356 aaPredicted RBP17.92■□□□□ 0.46
PHF1-202ENST00000374516 APOBEC3GQ9HC16 384 aaKnown RBP17.92■□□□□ 0.46
PHF1-202ENST00000374516 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.91■□□□□ 0.46
PHF1-202ENST00000374516 B4GALT5O43286 388 aa17.91■□□□□ 0.46
PHF1-202ENST00000374516 GRIN3BO60391 1043 aa17.91■□□□□ 0.46
PHF1-202ENST00000374516 CELF2O95319 508 aaKnown RBP17.91■□□□□ 0.46
PHF1-202ENST00000374516 KRT16P08779 473 aa17.91■□□□□ 0.46
PHF1-202ENST00000374516 KCNJ1P48048 391 aa17.91■□□□□ 0.46
PHF1-202ENST00000374516 OSTNP61366 133 aa17.91■□□□□ 0.46
PHF1-202ENST00000374516 MESDQ14696 234 aa17.91■□□□□ 0.46
PHF1-202ENST00000374516 CDCA2Q69YH5 1023 aaPredicted RBP17.91■□□□□ 0.46
PHF1-202ENST00000374516 ZBTB8OSQ8IWT0 167 aa17.91■□□□□ 0.46
PHF1-202ENST00000374516 KIF2BQ8N4N8 673 aa17.91■□□□□ 0.46
PHF1-202ENST00000374516 AFG1LQ8WV93 481 aa17.91■□□□□ 0.46
PHF1-202ENST00000374516 PRCCQ92733 491 aaPredicted RBP17.91■□□□□ 0.46
PHF1-202ENST00000374516 SERPINB12Q96P63 405 aa17.91■□□□□ 0.46
PHF1-202ENST00000374516 PTPN18Q99952 460 aa17.91■□□□□ 0.46
PHF1-202ENST00000374516 DDX23Q9BUQ8 820 aaKnown RBP17.91■□□□□ 0.46
PHF1-202ENST00000374516 ERAP1Q9NZ08 941 aa17.91■□□□□ 0.46
PHF1-202ENST00000374516 MTUS1Q9ULD2 1270 aa17.91■□□□□ 0.46
PHF1-202ENST00000374516 HBP1O60381 514 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 DIAPH2O60879 1101 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 ZC3H11AO75152 810 aaKnown RBP eCLIP17.9■□□□□ 0.462e-10■■■□□ 16.8
PHF1-202ENST00000374516 GJB6O95452 261 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 ZNF286BP0CG31 522 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 ENPEPQ07075 957 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 VSTM1Q6UX27 236 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 MAMDC4Q6UXC1 1216 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 BZW1Q7L1Q6 419 aaKnown RBP17.9■□□□□ 0.46
PHF1-202ENST00000374516 DPP9Q86TI2 863 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 SLC13A5Q86YT5 568 aaPredicted RBP17.9■□□□□ 0.46
PHF1-202ENST00000374516 WNT8AQ9H1J5 351 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 MINDY3Q9H8M7 445 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 RRAGCQ9HB90 399 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 ARL2BPQ9Y2Y0 163 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 FAM189A1O60320 539 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 CST3P01034 146 aaPredicted RBP17.9■□□□□ 0.46
PHF1-202ENST00000374516 LGALS2P05162 132 aa17.9■□□□□ 0.46
PHF1-202ENST00000374516 GZMAP12544 262 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms