RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ANAPC7Q9UJX3 599 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 NME7Q9Y5B8 376 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 NFS1Q9Y697 457 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 ITGB3P05106 788 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 FAM163BP0C2L3 166 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 AKR1A1P14550 325 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 CYP2C19P33261 490 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 TERF2Q15554 542 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 TRADDQ15628 312 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 MAATS1Q7Z4T9 603 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 MCRS1Q96EZ8 462 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 DDX47Q9H0S4 455 aaKnown RBP13.35□□□□□ -0.27
PRPF4-202ENST00000374199 SMYD3Q9H7B4 428 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 ST7Q9NRC1 585 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 GDAP2Q9NXN4 497 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 CHORDC1Q9UHD1 332 aaPredicted RBP13.35□□□□□ -0.27
PRPF4-202ENST00000374199 C3orf70A6NLC5 250 aaPredicted RBP13.35□□□□□ -0.27
PRPF4-202ENST00000374199 PFKMP08237 780 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 FAM153BP0C7A2 387 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 RBP5P82980 135 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 GUCY2DQ02846 1103 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 CNGA2Q16280 664 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 FAM153CQ494X1 144 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 ZNF667Q5HYK9 610 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 AADACL2Q6P093 401 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 MMS22LQ6ZRQ5 1243 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 POLNQ7Z5Q5 900 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 CDR2LQ86X02 465 aaPredicted RBP13.35□□□□□ -0.27
PRPF4-202ENST00000374199 TMEM35BQ8NCS4 154 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 TRAIPQ9BWF2 469 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 NEUROG2Q9H2A3 272 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 DPP3Q9NY33 737 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 GRHL1Q9NZI5 618 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 FAM153AQ9UHL3 310 aa13.35□□□□□ -0.27
PRPF4-202ENST00000374199 BARX2Q9UMQ3 279 aaPredicted RBP13.35□□□□□ -0.27
PRPF4-202ENST00000374199 O00370 1275 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 MED7O43513 233 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 ADAMTS4O75173 837 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 CSDE1O75534 798 aaKnown RBP13.34□□□□□ -0.27
PRPF4-202ENST00000374199 BRD2P25440 801 aaKnown RBP13.34□□□□□ -0.27
PRPF4-202ENST00000374199 GPD2P43304 727 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 FSCN1Q16658 493 aaKnown RBP13.34□□□□□ -0.27
PRPF4-202ENST00000374199 DRICH1Q6PGQ1 229 aaPredicted RBP13.34□□□□□ -0.27
PRPF4-202ENST00000374199 KLHDC9Q8NEP7 349 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 EXD1Q8NHP7 514 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 CCDC26Q8TAB7 109 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 LENG1Q96BZ8 264 aaPredicted RBP13.34□□□□□ -0.27
PRPF4-202ENST00000374199 TMEM176AQ96HP8 235 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 ZNF668Q96K58 619 aaPredicted RBP13.34□□□□□ -0.27
PRPF4-202ENST00000374199 HERPUD2Q9BSE4 406 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 EIF2AQ9BY44 585 aaKnown RBP13.34□□□□□ -0.27
PRPF4-202ENST00000374199 HMGXB4Q9UGU5 601 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 IP6K2Q9UHH9 426 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 STRIP2Q9ULQ0 834 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 SIGLEC16A6NMB1 481 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 OAS2P29728 719 aaKnown RBP13.34□□□□□ -0.27
PRPF4-202ENST00000374199 IRX5P78411 483 aaPredicted RBP13.34□□□□□ -0.27
PRPF4-202ENST00000374199 OGDHQ02218 1023 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 KIZQ2M2Z5 673 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 LLGL2Q6P1M3 1020 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 DENND1BQ6P3S1 775 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 LCLAT1Q6UWP7 414 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 ZDHHC24Q6UX98 284 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 TMEM130Q8N3G9 435 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 RNF216Q9NWF9 866 aaPredicted RBP13.34□□□□□ -0.27
PRPF4-202ENST00000374199 AMACRQ9UHK6 382 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 TCRBV7S2A1N4TA0A589 114 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 TREHO43280 583 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 PPFIA2O75334 1257 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 ERLIN2O94905 339 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 RPLP2P05387 115 aaKnown RBP13.34□□□□□ -0.27
PRPF4-202ENST00000374199 RARAP10276 462 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 VDRP11473 427 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 CYP2C9P11712 490 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 CAP1Q01518 475 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 PTPN11Q06124 597 aaPredicted RBP13.34□□□□□ -0.27
PRPF4-202ENST00000374199 PTPN20Q4JDL3 420 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 HPDLQ96IR7 371 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 ADPGKQ9BRR6 497 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 ERP44Q9BS26 406 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 FAM114A2Q9NRY5 505 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 GTF2IRD1Q9UHL9 959 aa13.34□□□□□ -0.27
PRPF4-202ENST00000374199 TAS2R40P59535 323 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 COPS2P61201 443 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 TAF2Q6P1X5 1199 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 ANKS1BQ7Z6G8 1248 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 XYLT1Q86Y38 959 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 SMG8Q8ND04 991 aaKnown RBP13.33□□□□□ -0.28
PRPF4-202ENST00000374199 TRIB2Q92519 343 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 C11orf70Q9BRQ4 267 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 NFU1Q9UMS0 254 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 EFR3BQ9Y2G0 817 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 MYADML2A6NDP7 307 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 TTI1O43156 1089 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 POLR2BP30876 1174 aaKnown RBP13.33□□□□□ -0.28
PRPF4-202ENST00000374199 GBP1P32455 592 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 LACTBP83111 547 aaPredicted RBP13.33□□□□□ -0.28
PRPF4-202ENST00000374199 SLC25A11Q02978 314 aaKnown RBP13.33□□□□□ -0.28
PRPF4-202ENST00000374199 CBLBQ13191 982 aa13.33□□□□□ -0.28
PRPF4-202ENST00000374199 ZNF211Q13398 564 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms