RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 AGPSO00116 658 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 CHUKO15111 745 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 ZMYND10O75800 440 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 FGFR1P11362 822 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 AKAP5P24588 427 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 PREPLQ4J6C6 727 aaPredicted RBP15.22■□□□□ 0.03
HMGA1-203ENST00000374116 EPC2Q52LR7 807 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 C8orf74Q6P047 294 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 SYCE1Q8N0S2 351 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 SMG8Q8ND04 991 aaKnown RBP15.22■□□□□ 0.03
HMGA1-203ENST00000374116 AENQ8WTP8 325 aaKnown RBP15.22■□□□□ 0.03
HMGA1-203ENST00000374116 MS4A14Q96JA4 679 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 PBKQ96KB5 322 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 TRIM6Q9C030 488 aaPredicted RBP15.22■□□□□ 0.03
HMGA1-203ENST00000374116 EHD2Q9NZN4 543 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 STIM2Q9P246 746 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 GGA2Q9UJY4 613 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 PCDHB2Q9Y5E7 798 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 H0YCG3 227 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 ABLIM1O14639 778 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 KIF4AO95239 1232 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 ADRB2P07550 413 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 MYOGP15173 224 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 ATF7P17544 494 aaPredicted RBP15.22■□□□□ 0.03
HMGA1-203ENST00000374116 ENPEPQ07075 957 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 ZNF568Q3ZCX4 644 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 ZBTB41Q5SVQ8 909 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 FBXW10Q5XX13 1052 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 PHLDB3Q6NSJ2 640 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 SLC27A1Q6PCB7 646 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 SLC24A5Q71RS6 500 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 THNSL1Q8IYQ7 743 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 TPCN2Q8NHX9 752 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 LNX1Q8TBB1 728 aaPredicted RBP15.22■□□□□ 0.03
HMGA1-203ENST00000374116 SELENOOQ9BVL4 669 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 CAPS2Q9BXY5 557 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 PTPRHQ9HD43 1115 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 CHST12Q9NRB3 414 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 SMARCAL1Q9NZC9 954 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 DMGDHQ9UI17 866 aaKnown RBP15.22■□□□□ 0.03
HMGA1-203ENST00000374116 KCNG1Q9UIX4 513 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 IPPQ9Y573 584 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 SLC4A7Q9Y6M7 1214 aa15.22■□□□□ 0.03
HMGA1-203ENST00000374116 GOLGA6CA6NDK9 693 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 CLSTN1O94985 981 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 GOLGA6DP0CG33 693 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 MYBL2P10244 700 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 AFF1P51825 1210 aaKnown RBP15.21■□□□□ 0.03
HMGA1-203ENST00000374116 WLSQ5T9L3 541 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 SLFN11Q7Z7L1 901 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 ECHDC2Q86YB7 292 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 TDHQ8IZJ6 230 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 HDAC7Q8WUI4 952 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 MFSD14AQ96MC6 490 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 CDT1Q9H211 546 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 PRO3102Q9H379 93 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 GOLGA6AQ9NYA3 693 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 KLK14Q9P0G3 267 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 TNFSF13BQ9Y275 285 aa15.21■□□□□ 0.03
HMGA1-203ENST00000374116 TRIOBPQ9H2D6 2365 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 A0A0U1RQF3 1178 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 SRRM3A6NNA2 597 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-203ENST00000374116 PPP1R12AO14974 1030 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-203ENST00000374116 TOM1L1O75674 476 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 BAIAP3O94812 1187 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 AMHP03971 560 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 TMEM253P0C7T8 217 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 ATP2A2P16615 1042 aaKnown RBP15.2■□□□□ 0.02
HMGA1-203ENST00000374116 SCP2P22307 547 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 AXLP30530 894 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 ELF1P32519 619 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 ABCD1P33897 745 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 GGCXP38435 758 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 TNFSF9P41273 254 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 GALCP54803 685 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 PCBP1Q15365 356 aaKnown RBP eCLIP15.2■□□□□ 0.024e-50■■■■■ 45.9
HMGA1-203ENST00000374116 SNRNP35Q16560 246 aaKnown RBP15.2■□□□□ 0.02
HMGA1-203ENST00000374116 PAN2Q504Q3 1202 aaKnown RBP15.2■□□□□ 0.02
HMGA1-203ENST00000374116 CBWD2Q8IUF1 395 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 SAAL1Q96ER3 474 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 TMEM117Q9H0C3 514 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 SNTG2Q9NY99 539 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 PACSIN2Q9UNF0 486 aaPredicted RBP15.2■□□□□ 0.02
HMGA1-203ENST00000374116 PCDHB7Q9Y5E2 793 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 NCANO14594 1321 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 GOLGA8IPA6NC78 632 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 GOLGA8JA6NMD2 632 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 CLDN3O15551 220 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 TNFAIP3P21580 790 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 GARTP22102 1010 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 PROZP22891 400 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 BMP8BP34820 402 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 PBX2P40425 430 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 RASIP1Q5U651 963 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 EMBQ6PCB8 327 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 MPZL3Q6UWV2 235 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 GLYCTKQ8IVS8 523 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 IFT20Q8IY31 132 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 CRIPAKQ8N1N5 446 aa15.2■□□□□ 0.02
HMGA1-203ENST00000374116 GIMAP7Q8NHV1 300 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms