RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 OSBPL8Q9BZF1 889 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 SPATS2LQ9NUQ6 558 aaKnown RBP11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 KLHL11Q9NVR0 708 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 FBXL5Q9UKA1 691 aa11.6□□□□□ -0.55
PHACTR4-202ENST00000373839 SPHKAPQ2M3C7 1700 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 KRT87PA6NCN2 255 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 ATICP31939 592 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 STIP1P31948 543 aaKnown RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 PLA2G4FQ68DD2 849 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 GPAT2Q6NUI2 795 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 ELMO2Q96JJ3 720 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 SPATA17Q96L03 361 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 ZNF518BQ9C0D4 1074 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 TBX20Q9UMR3 447 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 STX7O15400 261 aaKnown RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 VCLP18206 1134 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 ZNF200P98182 395 aaPredicted RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 ITPK1Q13572 414 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 DNAL1Q4LDG9 190 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 DCAF6Q58WW2 860 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 BEND6Q5SZJ8 279 aaPredicted RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 TIGD7Q6NT04 549 aaPredicted RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 SAMD7Q7Z3H4 446 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 TNIP2Q8NFZ5 429 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 CMTM5Q96DZ9 223 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 SMYD3Q9H7B4 428 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 UTP6Q9NYH9 597 aaKnown RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 KANSL3Q9P2N6 904 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 CRLS1Q9UJA2 301 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 GTF3C4Q9UKN8 822 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 ARIH2O95376 493 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 FEZF2Q8TBJ5 459 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 CPA5Q8WXQ8 436 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 GMCL1Q96IK5 515 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 AGBL1Q96MI9 1066 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 DCTN4Q9UJW0 460 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 NPHP3-ACAD11A0A0J9YXS1 232 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 H2AFYO75367 372 aaKnown RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 VDRP11473 427 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 NCAM1P13591 858 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 TP53BP2Q13625 1128 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 E4F1Q66K89 784 aaPredicted RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 LRRC8EQ6NSJ5 796 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 TAAR1Q96RJ0 339 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 ROPN1BQ9BZX4 212 aaPredicted RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 RANBP17Q9H2T7 1088 aaKnown RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 ROPN1Q9HAT0 212 aaPredicted RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 FAM49BQ9NUQ9 324 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 DPP3Q9NY33 737 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 IQSEC2Q5JU85 1478 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 MANSC4A6NHS7 340 aaPredicted RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 F5H5T6 163 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 ZSCAN9O15535 394 aaPredicted RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 MYBP10242 640 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 TMEM259Q4ZIN3 620 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 LRRC71Q8N4P6 559 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 GMCL1P1Q8NEA9 526 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 TADA1Q96BN2 335 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 TMEM117Q9H0C3 514 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 GOLPH3Q9H4A6 298 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 TRPM5Q9NZQ8 1165 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 TUBE1Q9UJT0 475 aa11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 PRG3Q9Y2Y8 225 aaPredicted RBP11.59□□□□□ -0.55
PHACTR4-202ENST00000373839 MYL2P10916 166 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 VEGFAP15692 232 aaPredicted RBP11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 EPHX2P34913 555 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 GGCXP38435 758 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 STX3Q13277 289 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 ZNF280DQ6N043 979 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 FAM117BQ6P1L5 589 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 DNERQ8NFT8 737 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 AGAP3Q96P47 875 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 TARS2Q9BW92 718 aaKnown RBP11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 DNAJC5Q9H3Z4 198 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 ECT2Q9H8V3 914 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 XPO7Q9UIA9 1087 aaKnown RBP11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 F5H423 210 aaPredicted RBP11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 H0Y626 953 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 CXCL11O14625 94 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 SOAT2O75908 522 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 SERPIND1P05546 499 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 SNRPAP09012 282 aaKnown RBP11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 PTGER2P43116 358 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 AASDHQ4L235 1098 aaPredicted RBP11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 AP1ARQ63HQ0 302 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 MPZL3Q6UWV2 235 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 TRIM48Q8IWZ4 208 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 ABHD8Q96I13 439 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 FAM161BQ96MY7 647 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 CD274Q9NZQ7 290 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 MRFAP1Q9Y605 127 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 CHGBP05060 677 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 NCKAP1LP55160 1127 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 HIC1Q14526 733 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 SPDYAQ5MJ70 313 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 MRNIPQ6NTE8 343 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 RGS9BPQ6ZS82 235 aa11.58□□□□□ -0.56
PHACTR4-202ENST00000373839 ITIH5Q86UX2 942 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms