RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 SKIP12755 728 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 ERFP50548 548 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 IL9RQ01113 521 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 PARP6Q2NL67 630 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 OR6J1Q8NGC5 347 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 MAGEB18Q96M61 343 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 SERPINB12Q96P63 405 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 TMEM109Q9BVC6 243 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 POLR3FQ9H1D9 316 aaPredicted RBP11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 SLCO1B3Q9NPD5 702 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 MTUS1Q9ULD2 1270 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 ASB3Q9Y575 518 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 E7ENQ6 273 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 AKAP3O75969 853 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 NR3C1P04150 777 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 TMEM253P0C7T8 217 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 CETN2P41208 172 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 PPM1FP49593 454 aaPredicted RBP11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 RASSF2P50749 326 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 TFDP1Q14186 410 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 RCN1Q15293 331 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 TMED2Q15363 201 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 PPP4R3CPQ6ZMV5 832 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 ARMCX2Q7L311 632 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 PHC3Q8NDX5 983 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 PSPC1Q8WXF1 523 aaKnown RBP11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 GPRC5CQ9NQ84 441 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 CHKBQ9Y259 395 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 CNTRLQ7Z7A1 2325 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 ATP5HO75947 161 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 FOXN2P32314 431 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 CACNA2D1P54289 1103 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 MARSP56192 900 aaKnown RBP11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 DRAP1Q14919 205 aaPredicted RBP11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 ARHGEF6Q15052 776 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 SGSM1Q2NKQ1 1148 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 TMEM119Q4V9L6 283 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 PALB2Q86YC2 1186 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 CCNJLQ8IV13 435 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 CYP4X1Q8N118 509 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 RDM1Q8NG50 284 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 MAIP1Q8WWC4 291 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 RBPJLQ9UBG7 517 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 USH1CQ9Y6N9 552 aa11.81□□□□□ -0.52
RPRD1B-201ENST00000373433 RASA4BC9J798 803 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 ABLIM1O14639 778 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 RASA4O43374 803 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 SPOPO43791 374 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 ECEL1O95672 775 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 MYL3P08590 195 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 UBTFL6P0CB48 400 aaPredicted RBP11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 TGFB3P10600 412 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 TAC1P20366 129 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 GIT2Q14161 759 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 SNX30Q5VWJ9 437 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 EPM2AIP1Q7L775 607 aaPredicted RBP11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 RHPN2Q8IUC4 686 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 EXOC8Q8IYI6 725 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 BRI3BPQ8WY22 251 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 PWWP2AQ96N64 755 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 ADAM33Q9BZ11 813 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 SMARCAD1Q9H4L7 1026 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 COG5Q9UP83 839 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 SUPT20HL2P0C7V6 817 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 CHKAP35790 457 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 VHLP40337 213 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 ZC3H12AQ5D1E8 599 aaKnown RBP11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 IRGCQ6NXR0 463 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 TRMT10CQ7L0Y3 403 aaKnown RBP11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 KCTD17Q8N5Z5 321 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 C1orf54Q8WWF1 131 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 ANKEF1Q9NU02 776 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 TYW1Q9NV66 732 aaKnown RBP11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 PCMTD2Q9NV79 361 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 KCND2Q9NZV8 630 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 DNAJC12Q9UKB3 198 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 PHTF1Q9UMS5 762 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 SRCAPQ6ZRS2 3230 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 IGLV3-22A0A075B6J6 115 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 M0QZ92 97 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 SOX5P35711 763 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 COILP38432 576 aaPredicted RBP11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 ALCAMQ13740 583 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 ZRSR2Q15696 482 aaKnown RBP11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 EDRF1Q3B7T1 1238 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 MFSD14CQ5VZR4 134 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 FRMD5Q7Z6J6 570 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 PPFIBP2Q8ND30 876 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 FAM81AQ8TBF8 368 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 ZFAND2BQ8WV99 257 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 NLRP7Q8WX94 980 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 SCG3Q8WXD2 468 aaKnown RBP11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 GRAMD1AQ96CP6 724 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 RBM41Q96IZ5 413 aaKnown RBP11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 DDX50Q9BQ39 737 aaKnown RBP11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 DCLRE1BQ9H816 532 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 LRCH1Q9Y2L9 728 aa11.8□□□□□ -0.52
RPRD1B-201ENST00000373433 SOCS7O14512 581 aa11.79□□□□□ -0.52
RPRD1B-201ENST00000373433 ZCCHC18P0CG32 403 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms