RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 TRAFD1O14545 582 aaPredicted RBP14.44□□□□□ -0.1
USP49-201ENST00000373006 GYG2O15488 501 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 ZBED4O75132 1171 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 P4HBP07237 508 aaKnown RBP14.44□□□□□ -0.1
USP49-201ENST00000373006 NFX1Q12986 1120 aaKnown RBP14.44□□□□□ -0.1
USP49-201ENST00000373006 FAM182AQ5T1J6 154 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 B3GNT9Q6UX72 402 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 TCP10LQ8TDR4 215 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 PTPRN2Q92932 1015 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 TMEM121Q9BTD3 319 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 TLR3O15455 904 aaKnown RBP14.44□□□□□ -0.1
USP49-201ENST00000373006 GSC2O15499 205 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 LIASO43766 372 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 ATP9AO75110 1047 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 TBX10O75333 385 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 PYGBP11216 843 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 SERPINB3P29508 390 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 VHLP40337 213 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 CETN2P41208 172 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 ZBTB16Q05516 673 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 TFDP1Q14186 410 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 VPS52Q8N1B4 723 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.44□□□□□ -0.1
USP49-201ENST00000373006 MCUR1Q96AQ8 359 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 FAM136AQ96C01 138 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 TMX4Q9H1E5 349 aaPredicted RBP14.44□□□□□ -0.1
USP49-201ENST00000373006 ANKFY1Q9P2R3 1169 aa14.44□□□□□ -0.1
USP49-201ENST00000373006 SAE1Q9UBE0 346 aaPredicted RBP14.44□□□□□ -0.1
USP49-201ENST00000373006 CCDC22O60826 627 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 TROVE2P10155 538 aaKnown RBP eCLIP14.43□□□□□ -0.1
USP49-201ENST00000373006 YWHABP31946 246 aaKnown RBP14.43□□□□□ -0.1
USP49-201ENST00000373006 SPP2Q13103 211 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 MFSD7Q6UXD7 560 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 BTBD10Q9BSF8 475 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 TBX20Q9UMR3 447 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 COQ4Q9Y3A0 265 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 NRAPQ86VF7 1730 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 HAUS5O94927 633 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 NPTXRO95502 500 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 CPA2P48052 419 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 GPX6P59796 221 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 RPL7AP62424 266 aaKnown RBP14.43□□□□□ -0.1
USP49-201ENST00000373006 MAMLD1Q13495 774 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 UGCGQ16739 394 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 RINLQ6ZS11 566 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 IL31RAQ8NI17 732 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 FAM81BQ96LP2 452 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 DDX50Q9BQ39 737 aaKnown RBP14.43□□□□□ -0.1
USP49-201ENST00000373006 MXRA8Q9BRK3 442 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 AVENQ9NQS1 362 aaPredicted RBP14.43□□□□□ -0.1
USP49-201ENST00000373006 FBXO28Q9NVF7 368 aa14.43□□□□□ -0.1
USP49-201ENST00000373006 PSMC3IPQ9P2W1 217 aaPredicted RBP14.43□□□□□ -0.1
USP49-201ENST00000373006 DENND3A2RUS2 1198 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 SIGLEC16A6NMB1 481 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 ALCAMQ13740 583 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 LBRQ14739 615 aaKnown RBP14.42□□□□□ -0.1
USP49-201ENST00000373006 TBC1D25Q3MII6 688 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 LRRC23Q53EV4 343 aaPredicted RBP14.42□□□□□ -0.1
USP49-201ENST00000373006 TTC7BQ86TV6 843 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 NLRX1Q86UT6 975 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 TDRPQ86YL5 185 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 SP8Q8IXZ3 490 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 ZDHHC15Q96MV8 337 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 TTC25Q96NG3 672 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 FAM213AQ9BRX8 229 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 TLE6Q9H808 572 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 ARMCX1Q9P291 453 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 SGK1O00141 431 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 CWF19L1Q69YN2 538 aaKnown RBP14.42□□□□□ -0.1
USP49-201ENST00000373006 MON1BQ7L1V2 547 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 KATNAL2Q8IYT4 538 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 VCXQ9H320 206 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 MANSC1Q9H8J5 431 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 LMCD1Q9NZU5 365 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 LNPEPQ9UIQ6 1025 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 ASB3Q9Y575 518 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 PCDHB2Q9Y5E7 798 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 ALOX15BO15296 676 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 PSTPIP1O43586 416 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 LMNAP02545 664 aaKnown RBP14.42□□□□□ -0.1
USP49-201ENST00000373006 QARSP47897 775 aaKnown RBP14.42□□□□□ -0.1
USP49-201ENST00000373006 WDR72Q3MJ13 1102 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 XKR9Q5GH70 373 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 TXNRD3NBQ6F5E7 133 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 OR52E8Q6IFG1 317 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 CENPUQ71F23 418 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 OGFOD1Q8N543 542 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 EXD1Q8NHP7 514 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 ITFG2Q969R8 447 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 SAR1AQ9NR31 198 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 C1orf112Q9NSG2 853 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 RHBDL2Q9NX52 303 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 SENP1Q9P0U3 644 aa14.42□□□□□ -0.1
USP49-201ENST00000373006 GREB1LQ9C091 1923 aaPredicted RBP14.42□□□□□ -0.1
USP49-201ENST00000373006 TTC36A6NLP5 189 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 PMM2O15305 246 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 RTN3O95197 1032 aaPredicted RBP14.41□□□□□ -0.1
USP49-201ENST00000373006 ETS2P15036 469 aa14.41□□□□□ -0.1
USP49-201ENST00000373006 HOXA10P31260 410 aaPredicted RBP14.41□□□□□ -0.1
USP49-201ENST00000373006 ARFIP2P53365 341 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms