RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 PABPC5Q96DU9 382 aaKnown RBP17.08■□□□□ 0.32
PFDN4-201ENST00000371419 MMS19Q96T76 1030 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 NXF1Q9UBU9 619 aaKnown RBP17.08■□□□□ 0.32
PFDN4-201ENST00000371419 FBXL5Q9UKA1 691 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 COQ4Q9Y3A0 265 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 CDY1Q9Y6F8 540 aa17.08■□□□□ 0.32
PFDN4-201ENST00000371419 PMM2O15305 246 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 ADAM12O43184 909 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 C1RP00736 705 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 AFPP02771 609 aaKnown RBP17.07■□□□□ 0.32
PFDN4-201ENST00000371419 P4HA1P13674 534 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 CLCN4P51793 760 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 MYL7Q01449 175 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 CETN1Q12798 172 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 ADAM15Q13444 863 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 RAB33AQ14088 237 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 SOWAHAQ2M3V2 549 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 CTC1Q2NKJ3 1217 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 HSP90AA4PQ58FG1 418 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 LLGL2Q6P1M3 1020 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 LIMS2Q7Z4I7 341 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 PALB2Q86YC2 1186 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 DHX40Q8IX18 779 aaKnown RBP17.07■□□□□ 0.32
PFDN4-201ENST00000371419 THEM5Q8N1Q8 247 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 SLC22A17Q8WUG5 538 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 RAB20Q9NX57 234 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 CLDND1Q9NY35 253 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 HCFC2Q9Y5Z7 792 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 COL6A3P12111 3177 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 BRWD1Q9NSI6 2320 aa17.07■□□□□ 0.32
PFDN4-201ENST00000371419 OR6C75A6NL08 312 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 KCNJ18B7U540 433 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 P4HA2O15460 535 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 LINC01565O15544 149 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 GLUD1P00367 558 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 FAM163BP0C2L3 166 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 SRGAP2BP0DMP2 458 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 MSNP26038 577 aaKnown RBP17.06■□□□□ 0.32
PFDN4-201ENST00000371419 EEF1GP26641 437 aaKnown RBP17.06■□□□□ 0.32
PFDN4-201ENST00000371419 KCNC3Q14003 757 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 KCNJ12Q14500 433 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 CDKAL1Q5VV42 579 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 TMEM184AQ6ZMB5 413 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 ADGRF2Q8IZF7 708 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 VN1R2Q8NFZ6 395 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 SEMA4DQ92854 862 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 PI4K2AQ9BTU6 479 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 TRIM5Q9C035 493 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 FANCLQ9NW38 375 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 POLIQ9UNA4 740 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 TSC2P49815 1807 aa17.06■□□□□ 0.32
PFDN4-201ENST00000371419 AP5Z1O43299 807 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 TACC1O75410 805 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 GLP2RO95838 553 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 EPCAMP16422 314 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 LHX1P48742 406 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 NOP14P78316 857 aaKnown RBP17.05■□□□□ 0.32
PFDN4-201ENST00000371419 RBM10P98175 930 aaKnown RBP17.05■□□□□ 0.32
PFDN4-201ENST00000371419 ROR1Q01973 937 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 MAN2A1Q16706 1144 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 TCP11X2Q5H9J9 407 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 WDR44Q5JSH3 913 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 SPOPLQ6IQ16 392 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 LILRA6Q6PI73 481 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 EP400NLQ6ZTU2 488 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 AOPEPQ8N6M6 819 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 CASP10Q92851 521 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 HLA-CQ95604 372 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 ELMO3Q96BJ8 720 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.05■□□□□ 0.32
PFDN4-201ENST00000371419 PRUNE2Q8WUY3 3088 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 GABRDO14764 452 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 TGM5O43548 720 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 CPB1P15086 417 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 WARSP23381 471 aaKnown RBP17.05■□□□□ 0.32
PFDN4-201ENST00000371419 CDC25BP30305 580 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 ZNF75DP51815 510 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 ARPP19P56211 112 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 NCAPHQ15003 741 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 ELMSAN1Q6PJG2 1045 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 OSTM1Q86WC4 334 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 OR10T2Q8NGX3 314 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 KBTBD7Q8WVZ9 684 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 RTP3Q9BQQ7 232 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 TUBGCP2Q9BSJ2 902 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 SMYD3Q9H7B4 428 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 UBE2ZQ9H832 354 aaPredicted RBP17.05■□□□□ 0.32
PFDN4-201ENST00000371419 APOBEC3GQ9HC16 384 aaKnown RBP17.05■□□□□ 0.32
PFDN4-201ENST00000371419 DDX43Q9NXZ2 648 aaKnown RBP17.05■□□□□ 0.32
PFDN4-201ENST00000371419 DPP7Q9UHL4 492 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 COG5Q9UP83 839 aa17.05■□□□□ 0.32
PFDN4-201ENST00000371419 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.04■□□□□ 0.32
PFDN4-201ENST00000371419 LRRN2O75325 713 aa17.04■□□□□ 0.32
PFDN4-201ENST00000371419 PRKCSHP14314 528 aaPredicted RBP17.04■□□□□ 0.32
PFDN4-201ENST00000371419 LTBRP36941 435 aa17.04■□□□□ 0.32
PFDN4-201ENST00000371419 TPGS2Q68CL5 300 aa17.04■□□□□ 0.32
PFDN4-201ENST00000371419 SCARA5Q6ZMJ2 495 aa17.04■□□□□ 0.32
PFDN4-201ENST00000371419 ZNF461Q8TAF7 563 aa17.04■□□□□ 0.32
PFDN4-201ENST00000371419 HDAC7Q8WUI4 952 aa17.04■□□□□ 0.32
PFDN4-201ENST00000371419 MRFAP1L1Q96HT8 127 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms