RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 KCNH2Q12809 1159 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 SLC10A6Q3KNW5 377 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 USP41Q3LFD5 358 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 CLLU1OSQ5K130 101 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 ATAT1Q5SQI0 421 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 C10orf67Q8IYJ2 551 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 USP38Q8NB14 1042 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 DRAXINQ8NBI3 349 aaPredicted RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 KIAA0895Q8NCT3 520 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 KIF18AQ8NI77 898 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 MRPL9Q9BYD2 267 aaKnown RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 KIF9Q9HAQ2 790 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 TLR9Q9NR96 1032 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 KANSL3Q9P2N6 904 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 LIMD1Q9UGP4 676 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 ADAM28Q9UKQ2 775 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 FNDC3AQ9Y2H6 1198 aaKnown RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 SMTNL1A8MU46 457 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 ZBTB42B2RXF5 422 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 TRDMT1O14717 391 aaKnown RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 KIAA0355O15063 1070 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 EDN1P05305 212 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 GALTP07902 379 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 SKIP12755 728 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 CD44P16070 742 aaKnown RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 BMPR1AP36894 532 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 SARSP49591 514 aaKnown RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 KCNQ1P51787 676 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 MAP3K7CLP57077 242 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 IFT88Q13099 833 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 TBC1D25Q3MII6 688 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 ZNF658Q5TYW1 1059 aaPredicted RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 HEATR6Q6AI08 1181 aaKnown RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 OR6B2Q6IFH4 312 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 RBM12BQ8IXT5 1001 aaKnown RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 NAT16Q8N8M0 369 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 MAB21L3Q8N8X9 362 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 ADAM32Q8TC27 787 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 NDRG1Q92597 394 aaKnown RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 EDEM1Q92611 657 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 KAT5Q92993 513 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 ZMAT2Q96NC0 199 aaKnown RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 SLC9A7Q96T83 725 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 TTPALQ9BTX7 342 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 EMILIN2Q9BXX0 1053 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 UPF3AQ9H1J1 476 aaKnown RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 UTP6Q9NYH9 597 aaKnown RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 NAGPAQ9UK23 515 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 MYO10Q9HD67 2058 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 CCDC195A0A1B0GUA6 201 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 HAS3O00219 553 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 LINC01565O15544 149 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 ATG7O95352 703 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 COL6A1P12109 1028 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 SLC9A1P19634 815 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 CYP2F1P24903 491 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 HOXA11P31270 313 aaPredicted RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 MYL5Q02045 173 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 TUSC3Q13454 348 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 TCEA2Q15560 299 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 TIGD5Q53EQ6 642 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 SYT10Q6XYQ8 523 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 MMS22LQ6ZRQ5 1243 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 SV2AQ7L0J3 742 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 MIEF2Q96C03 454 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 GSDMAQ96QA5 445 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 IQCGQ9H095 443 aaKnown RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 IRF2BPLQ9H1B7 796 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 SEMA6BQ9H3T3 888 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 SLC38A7Q9NVC3 462 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 CPSF2Q9P2I0 782 aaKnown RBP7.49□□□□□ -1.21
USP1-202ENST00000371146 DOCK1Q14185 1865 aa7.49□□□□□ -1.21
USP1-202ENST00000371146 A0A1W2PQ27 194 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 A0A1W2PQ64 194 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 A0A1W2PQD8 194 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 KPNA7A9QM74 516 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 CPP00450 1065 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 ADH1AP07327 375 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 C8AP07357 584 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 ADRB2P07550 413 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 LAG3P18627 525 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 CCNE1P24864 410 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 AVPR1AP37288 418 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 WASP42768 502 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 GLUD2P49448 558 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 SOX4Q06945 474 aaPredicted RBP7.48□□□□□ -1.21
USP1-202ENST00000371146 NME3Q13232 169 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 TSNAXIP1Q2TAA8 658 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 C1orf228Q6PIY5 440 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 TPGS1Q6ZTW0 290 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 SRLQ86TD4 932 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 ADGRF2Q8IZF7 708 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 SIX6OS1Q8N1H7 587 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 GOLGA1Q92805 767 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 DNAJC19Q96DA6 116 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 ZFYVE19Q96K21 471 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 ADAMTS10Q9H324 1103 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 CNTNAP2Q9UHC6 1331 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 XIRP2A4UGR9 3374 aa7.48□□□□□ -1.21
USP1-202ENST00000371146 TMEM265A0A087WTH1 108 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms