RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 COX16Q9P0S2 106 aa8.75□□□□□ -1.01
SSR2-202ENST00000368311 POLR2EP19388 210 aaKnown RBP8.74□□□□□ -1.01
SSR2-202ENST00000368311 RNASE9P60153 205 aaKnown RBP8.74□□□□□ -1.01
SSR2-202ENST00000368311 POLR2LP62875 67 aaKnown RBP8.74□□□□□ -1.01
SSR2-202ENST00000368311 MDM2Q00987 491 aaPredicted RBP8.74□□□□□ -1.01
SSR2-202ENST00000368311 CFAP221Q4G0U5 840 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 CCDC63Q8NA47 563 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 BORCS6Q96GS4 357 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 CARD6Q9BX69 1037 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 FSD1LQ9BXM9 530 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.74□□□□□ -1.01
SSR2-202ENST00000368311 SUSD2Q9UGT4 822 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 SCN7AQ01118 1682 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 WASHC5Q12768 1159 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 C12orf50Q8NA57 414 aaPredicted RBP8.74□□□□□ -1.01
SSR2-202ENST00000368311 CCNYQ8ND76 341 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 CEP295NLQ96MC4 621 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 FAM105AQ9NUU6 356 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 ZSCAN5CA6NGD5 496 aaPredicted RBP8.74□□□□□ -1.01
SSR2-202ENST00000368311 AP1G2O75843 785 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 SMPD1P17405 629 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 GJA8P48165 433 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 PSMC1P62191 440 aaKnown RBP8.74□□□□□ -1.01
SSR2-202ENST00000368311 PRPF38BQ5VTL8 546 aaKnown RBP8.74□□□□□ -1.01
SSR2-202ENST00000368311 CASC4Q6P4E1 433 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 LZTR1Q8N653 840 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 NXPE3Q969Y0 559 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 CFHR5Q9BXR6 569 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 KLC2Q9H0B6 622 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 PAEPP09466 180 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 CNPP09543 421 aaKnown RBP8.74□□□□□ -1.01
SSR2-202ENST00000368311 TRIM60Q495X7 471 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 AARS2Q5JTZ9 985 aaKnown RBP8.74□□□□□ -1.01
SSR2-202ENST00000368311 EOGTQ5NDL2 527 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 C11orf57Q6ZUT1 292 aaPredicted RBP8.74□□□□□ -1.01
SSR2-202ENST00000368311 HERVK_113Q902F9 699 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 C18orf8Q96DM3 657 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 MFSD14AQ96MC6 490 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 NLNQ9BYT8 704 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 IFNKQ9P0W0 207 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 SCAF8Q9UPN6 1271 aaKnown RBP8.74□□□□□ -1.01
SSR2-202ENST00000368311 MAD1L1Q9Y6D9 718 aa8.74□□□□□ -1.01
SSR2-202ENST00000368311 H3BM21 787 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 OPA1O60313 960 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 NAA25Q14CX7 972 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 HECTD3Q5T447 861 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 KLC3Q6P597 504 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 METTL16Q86W50 562 aaKnown RBP8.73□□□□□ -1.01
SSR2-202ENST00000368311 REEP2Q9BRK0 252 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 NDST4Q9H3R1 872 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 NSMCE4AQ9NXX6 385 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 PASKQ96RG2 1323 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 TIMM44O43615 452 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 RPN2P04844 631 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 ARP10275 920 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 PMLP29590 882 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 PLA2G4AP47712 749 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 PIGHQ14442 188 aaPredicted RBP8.73□□□□□ -1.01
SSR2-202ENST00000368311 PHKG1Q16816 387 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 MORN1Q5T089 497 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 ZFPM1Q8IX07 1006 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 FBRSQ9HAH7 460 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 FAM207AQ9NSI2 230 aaPredicted RBP8.73□□□□□ -1.01
SSR2-202ENST00000368311 CWC15Q9P013 229 aaKnown RBP8.73□□□□□ -1.01
SSR2-202ENST00000368311 GOLGA8SH3BPF8 625 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 RHOBTB1O94844 696 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 PTENP60484 403 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 PPP1R15BQ5SWA1 713 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 PLPP4Q5VZY2 271 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 PLA2G4FQ68DD2 849 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 GRAMD4Q6IC98 578 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 HJURPQ8NCD3 748 aaPredicted RBP8.73□□□□□ -1.01
SSR2-202ENST00000368311 TSC1Q92574 1164 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 ARL8AQ96BM9 186 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 ZBED3Q96IU2 234 aaPredicted RBP8.73□□□□□ -1.01
SSR2-202ENST00000368311 TCF25Q9BQ70 676 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 DNMT3LQ9UJW3 386 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 FNDC3AQ9Y2H6 1198 aaKnown RBP8.73□□□□□ -1.01
SSR2-202ENST00000368311 KDM3BQ7LBC6 1761 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 ASLP04424 464 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 CD52P31358 61 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 ZSCAN23Q3MJ62 389 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 CLEC10AQ8IUN9 316 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 LRRC49Q8IUZ0 686 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 BRSK2Q8IWQ3 736 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 ATPAF2Q8N5M1 289 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 ZFP14Q9HCL3 533 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 DNAJC12Q9UKB3 198 aa8.73□□□□□ -1.01
SSR2-202ENST00000368311 MORC2Q9Y6X9 1032 aaPredicted RBP8.73□□□□□ -1.01
SSR2-202ENST00000368311 TTI1O43156 1089 aa8.72□□□□□ -1.01
SSR2-202ENST00000368311 ZBED1O96006 694 aa8.72□□□□□ -1.01
SSR2-202ENST00000368311 RPIAP49247 311 aa8.72□□□□□ -1.01
SSR2-202ENST00000368311 DEUP1Q05D60 604 aa8.72□□□□□ -1.01
SSR2-202ENST00000368311 P3H1Q32P28 736 aa8.72□□□□□ -1.01
SSR2-202ENST00000368311 WDR45BQ5MNZ6 344 aa8.72□□□□□ -1.01
SSR2-202ENST00000368311 ADGRA1Q86SQ6 560 aa8.72□□□□□ -1.01
SSR2-202ENST00000368311 CATSPER3Q86XQ3 398 aa8.72□□□□□ -1.01
SSR2-202ENST00000368311 SKA2Q8WVK7 121 aaPredicted RBP8.72□□□□□ -1.01
SSR2-202ENST00000368311 ATRIPQ8WXE1 791 aa8.72□□□□□ -1.01
SSR2-202ENST00000368311 DRC3Q9H069 523 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms