RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 SPATA18Q8TC71 538 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 CLEC4MQ9H2X3 399 aaPredicted RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 ING3Q9NXR8 418 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 ARL2BPQ9Y2Y0 163 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 KIF24Q5T7B8 1368 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 NCF1BA6NI72 391 aaPredicted RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 NCF1CA8MVU1 366 aaPredicted RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 COPEO14579 308 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 GPR182O15218 404 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 APOA4P06727 396 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 NCF1P14598 390 aaPredicted RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 FGD2Q7Z6J4 655 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 CHSY1Q86X52 802 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 CATSPER3Q86XQ3 398 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 ZMYND12Q9H0C1 365 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 PDE11AQ9HCR9 933 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 HSPBP1Q9NZL4 362 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 SLC39A10Q9ULF5 831 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 TIMM13Q9Y5L4 95 aaPredicted RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 ATP1A1P05023 1023 aaKnown RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 TCP1P17987 556 aaKnown RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 EIF3EP60228 445 aaKnown RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 BEX3Q00994 111 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 PWP1Q13610 501 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 KRT31Q15323 416 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 DNAJB3Q8WWF6 145 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 PRMT6Q96LA8 375 aaPredicted RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 FAM161BQ96MY7 647 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 CNOT10Q9H9A5 744 aaKnown RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 CYP4F11Q9HBI6 524 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 PARVAQ9NVD7 372 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 NOP53Q9NZM5 478 aaKnown RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 HPS5Q9UPZ3 1129 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 SPATA31A5Q5VU36 1347 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 SPATA31A7Q8IWB4 1347 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 AATKQ6ZMQ8 1374 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 PLEKHG2Q9H7P9 1386 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 AP2B1P63010 937 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 CAPRIN2Q6IMN6 1127 aaKnown RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 TRIM69Q86WT6 500 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 GSPT2Q8IYD1 628 aaKnown RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 NUP93Q8N1F7 819 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 JADE3Q92613 823 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 ELMO3Q96BJ8 720 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 CYP26B1Q9NR63 512 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 CHST12Q9NRB3 414 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 DPP3Q9NY33 737 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 GSG1L2A8MUP6 293 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 PDE9AO76083 593 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 ERFP50548 548 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 PMS2P54278 862 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 RBP5P82980 135 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 UBE3AQ05086 875 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 NCOA4Q13772 614 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 TMEM132BQ14DG7 1078 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 E4F1Q66K89 784 aaPredicted RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 ERAP2Q6P179 960 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 PLD3Q8IV08 490 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 FBXO32Q969P5 355 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 NSUN4Q96CB9 384 aaKnown RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 STN1Q9H668 368 aaKnown RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 RNF14Q9UBS8 474 aa7.39□□□□□ -1.23
SPTA1-201ENST00000368147 TDRKHQ9Y2W6 561 aaKnown RBP7.39□□□□□ -1.23
SPTA1-201ENST00000368147 CSF1RP07333 972 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 MRPS35P82673 323 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 MMRN1Q13201 1228 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 ESRP1Q6NXG1 681 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 ANO5Q75V66 913 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 CHMP1BQ7LBR1 199 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 CNPY4Q8N129 248 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 PDIK1LQ8N165 341 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 MDM1Q8TC05 714 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 SEPT1Q8WYJ6 367 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 NMRK2Q9NPI5 230 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 TMEM161AQ9NX61 479 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 CHORDC1Q9UHD1 332 aaPredicted RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 BLOC1S6Q9UL45 172 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 IPPQ9Y573 584 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 LRRIQ1Q96JM4 1722 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 DCTN3O75935 186 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 MAP3K6O95382 1288 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 GUCA1CO95843 209 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 EIF2S3P41091 472 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 EPHB3P54753 998 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 CCL23P55773 120 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 PLIN5Q00G26 463 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 DOK6Q6PKX4 331 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 WDR75Q8IWA0 830 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 OMA1Q96E52 524 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 HES6Q96HZ4 224 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 ZFP42Q96MM3 310 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 FMO2Q99518 471 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 TSEN34Q9BSV6 310 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 KDM4CQ9H3R0 1056 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 EXO5Q9H790 373 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 METTL5Q9NRN9 209 aaKnown RBP7.38□□□□□ -1.23
SPTA1-201ENST00000368147 PJA2O43164 708 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 SLC25A27O95847 323 aa7.38□□□□□ -1.23
SPTA1-201ENST00000368147 RPL19P84098 196 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms