RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 CEP120Q8N960 986 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 TSTD1Q8NFU3 115 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 MDM1Q8TC05 714 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 PIGOQ8TEQ8 1089 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 PSMG2Q969U7 264 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 HSD17B14Q9BPX1 270 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 NCOA5Q9HCD5 579 aaKnown RBP16.05■□□□□ 0.16
VAMP4-202ENST00000367740 TMEM74BQ9NUR3 256 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 FARP1Q9Y4F1 1045 aaPredicted RBP16.05■□□□□ 0.16
VAMP4-202ENST00000367740 CEP192Q8TEP8 1941 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 TSC2P49815 1807 aa16.05■□□□□ 0.16
VAMP4-202ENST00000367740 SHROOM3Q8TF72 1996 aa16.04■□□□□ 0.16
VAMP4-202ENST00000367740 A0A087WWV3 80 aa16.04■□□□□ 0.16
VAMP4-202ENST00000367740 CCNT1O60563 726 aaKnown RBP16.04■□□□□ 0.16
VAMP4-202ENST00000367740 C1QL1O75973 258 aa16.04■□□□□ 0.16
VAMP4-202ENST00000367740 ARSAP15289 507 aa16.04■□□□□ 0.16
VAMP4-202ENST00000367740 MCM4P33991 863 aa16.04■□□□□ 0.16
VAMP4-202ENST00000367740 C19orf57Q0VDD7 668 aa16.04■□□□□ 0.16
VAMP4-202ENST00000367740 DNAJB7Q7Z6W7 309 aaPredicted RBP16.04■□□□□ 0.16
VAMP4-202ENST00000367740 TTC9BQ8N6N2 239 aa16.04■□□□□ 0.16
VAMP4-202ENST00000367740 APPL2Q8NEU8 664 aa16.04■□□□□ 0.16
VAMP4-202ENST00000367740 TBC1D32Q96NH3 1257 aa16.04■□□□□ 0.16
VAMP4-202ENST00000367740 P2RY13Q9BPV8 354 aa16.04■□□□□ 0.16
VAMP4-202ENST00000367740 TASP1Q9H6P5 420 aa16.04■□□□□ 0.16
VAMP4-202ENST00000367740 SLC38A7Q9NVC3 462 aa16.04■□□□□ 0.16
VAMP4-202ENST00000367740 MBD1Q9UIS9 605 aaPredicted RBP16.04■□□□□ 0.16
VAMP4-202ENST00000367740 TBX20Q9UMR3 447 aa16.04■□□□□ 0.16
VAMP4-202ENST00000367740 ATXN2Q99700 1313 aaKnown RBP16.03■□□□□ 0.16
VAMP4-202ENST00000367740 SOAT2O75908 522 aa16.03■□□□□ 0.16
VAMP4-202ENST00000367740 FGF19O95750 216 aa16.03■□□□□ 0.16
VAMP4-202ENST00000367740 ALDH1A3P47895 512 aa16.03■□□□□ 0.16
VAMP4-202ENST00000367740 NT5DC1Q5TFE4 455 aa16.03■□□□□ 0.16
VAMP4-202ENST00000367740 ANO7Q6IWH7 933 aa16.03■□□□□ 0.16
VAMP4-202ENST00000367740 SLC23A3Q6PIS1 610 aa16.03■□□□□ 0.16
VAMP4-202ENST00000367740 MCPH1Q8NEM0 835 aa16.03■□□□□ 0.16
VAMP4-202ENST00000367740 RIN3Q8TB24 985 aa16.03■□□□□ 0.16
VAMP4-202ENST00000367740 C18orf25Q96B23 403 aaPredicted RBP16.03■□□□□ 0.16
VAMP4-202ENST00000367740 CNOT6LQ96LI5 555 aaKnown RBP16.03■□□□□ 0.16
VAMP4-202ENST00000367740 FSCN3Q9NQT6 498 aa16.03■□□□□ 0.16
VAMP4-202ENST00000367740 TOPORSQ9NS56 1045 aaPredicted RBP16.03■□□□□ 0.16
VAMP4-202ENST00000367740 PCDHB8Q9UN66 801 aa16.03■□□□□ 0.16
VAMP4-202ENST00000367740 CCL26Q9Y258 94 aa16.03■□□□□ 0.16
VAMP4-202ENST00000367740 ASB3Q9Y575 518 aa16.03■□□□□ 0.16
VAMP4-202ENST00000367740 ZNF462Q96JM2 2506 aa16.03■□□□□ 0.16
VAMP4-202ENST00000367740 GON4LQ3T8J9 2241 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 ASXL3Q9C0F0 2248 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 MARCH6O60337 910 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 HMGB1P09429 215 aaKnown RBP16.02■□□□□ 0.16
VAMP4-202ENST00000367740 GRM5P41594 1212 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 PTGER3P43115 390 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 YARSP54577 528 aaKnown RBP16.02■□□□□ 0.16
VAMP4-202ENST00000367740 ATF7IP2Q5U623 682 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 DIEXFQ68CQ4 756 aaKnown RBP16.02■□□□□ 0.16
VAMP4-202ENST00000367740 CENPPQ6IPU0 288 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 CCNI2Q6ZMN8 369 aaPredicted RBP16.02■□□□□ 0.16
VAMP4-202ENST00000367740 ARMCX6Q7L4S7 300 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 SYT12Q8IV01 421 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 HDDC3Q8N4P3 179 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 MDGA1Q8NFP4 955 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 CRELD1Q96HD1 420 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 AIFM3Q96NN9 605 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 KIFC3Q9BVG8 833 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 SLC46A2Q9BY10 475 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 IL21Q9HBE4 155 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 SLC27A5Q9Y2P5 690 aa16.02■□□□□ 0.16
VAMP4-202ENST00000367740 MTMR11A4FU01 709 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 TNFRSF10BO14763 440 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 OAZ2O95190 189 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 KCNE1P15382 129 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 RPL9P32969 192 aaKnown RBP16.01■□□□□ 0.15
VAMP4-202ENST00000367740 GJA4P35212 333 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 NAMPTP43490 491 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 OSTNP61366 133 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 CCT2P78371 535 aaKnown RBP16.01■□□□□ 0.15
VAMP4-202ENST00000367740 AMPD2Q01433 879 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 YWHAHQ04917 246 aaPredicted RBP16.01■□□□□ 0.15
VAMP4-202ENST00000367740 GPR17Q13304 367 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 KRT32Q14532 448 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 GALNT17Q6IS24 598 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 SLFN12Q8IYM2 578 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 CMTM8Q8IZV2 173 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 OLIG1Q8TAK6 271 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 DEPTORQ8TB45 409 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 ADAMTS14Q8WXS8 1223 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 FNBP1Q96RU3 617 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 CDT1Q9H211 546 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 ANK1P16157 1881 aa16.01■□□□□ 0.15
VAMP4-202ENST00000367740 URB1O60287 2271 aaKnown RBP16■□□□□ 0.15
VAMP4-202ENST00000367740 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16■□□□□ 0.15
VAMP4-202ENST00000367740 CD59P13987 128 aa16■□□□□ 0.15
VAMP4-202ENST00000367740 PLA2G2AP14555 144 aa16■□□□□ 0.15
VAMP4-202ENST00000367740 ATP2B1P20020 1258 aa16■□□□□ 0.15
VAMP4-202ENST00000367740 PSMD2Q13200 908 aa16■□□□□ 0.15
VAMP4-202ENST00000367740 PEAR1Q5VY43 1037 aaPredicted RBP16■□□□□ 0.15
VAMP4-202ENST00000367740 LPCAT2Q7L5N7 544 aa16■□□□□ 0.15
VAMP4-202ENST00000367740 ITIH5Q86UX2 942 aa16■□□□□ 0.15
VAMP4-202ENST00000367740 TRIM22Q8IYM9 498 aa16■□□□□ 0.15
VAMP4-202ENST00000367740 TMEFF1Q8IYR6 380 aa16■□□□□ 0.15
VAMP4-202ENST00000367740 ATAD1Q8NBU5 361 aa16■□□□□ 0.15
VAMP4-202ENST00000367740 USP13Q92995 863 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms