RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 ACO1P21399 889 aaKnown RBP13.03□□□□□ -0.32
PTPN7-202ENST00000367279 GSCP56915 257 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-202ENST00000367279 WDR4P57081 412 aaKnown RBP13.03□□□□□ -0.32
PTPN7-202ENST00000367279 TFAMQ00059 246 aaKnown RBP13.03□□□□□ -0.32
PTPN7-202ENST00000367279 ORC1Q13415 861 aa13.03□□□□□ -0.32
PTPN7-202ENST00000367279 GNPTABQ3T906 1256 aa13.03□□□□□ -0.32
PTPN7-202ENST00000367279 XKR3Q5GH77 459 aa13.03□□□□□ -0.32
PTPN7-202ENST00000367279 CIAPIN1Q6FI81 312 aa13.03□□□□□ -0.32
PTPN7-202ENST00000367279 CDR2LQ86X02 465 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-202ENST00000367279 LRRC8CQ8TDW0 803 aa13.03□□□□□ -0.32
PTPN7-202ENST00000367279 ZNF526Q8TF50 670 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-202ENST00000367279 JDP2Q8WYK2 163 aa13.03□□□□□ -0.32
PTPN7-202ENST00000367279 RBM41Q96IZ5 413 aaKnown RBP13.03□□□□□ -0.32
PTPN7-202ENST00000367279 TMEM237Q96Q45 408 aa13.03□□□□□ -0.32
PTPN7-202ENST00000367279 SYNCQ9H7C4 482 aa13.03□□□□□ -0.32
PTPN7-202ENST00000367279 UTRNP46939 3433 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 H0YCG3 227 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 RGS20O76081 388 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 ANP32DO95626 131 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 KRT19P08727 400 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 GLRA2P23416 452 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 TARSP26639 723 aaKnown RBP13.02□□□□□ -0.32
PTPN7-202ENST00000367279 MARK3P27448 753 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 LMNB2Q03252 620 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 TRPC3Q13507 836 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 TRIM72Q6ZMU5 477 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 ECHDC2Q86YB7 292 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 ZCCHC9Q8N567 271 aaKnown RBP13.02□□□□□ -0.32
PTPN7-202ENST00000367279 GBP7Q8N8V2 638 aaPredicted RBP13.02□□□□□ -0.32
PTPN7-202ENST00000367279 TMEM174Q8WUU8 243 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 NSMCE1Q8WV22 266 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 SLITRK1Q96PX8 696 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 MTMR12Q9C0I1 747 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 RXFP1Q9HBX9 757 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 PICK1Q9NRD5 415 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 PHTF1Q9UMS5 762 aa13.02□□□□□ -0.32
PTPN7-202ENST00000367279 A0A1W2PPM1 405 aa13.02□□□□□ -0.33
PTPN7-202ENST00000367279 DNALI1O14645 258 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-202ENST00000367279 DIAPH2O60879 1101 aa13.02□□□□□ -0.33
PTPN7-202ENST00000367279 CDC25CP30307 473 aa13.02□□□□□ -0.33
PTPN7-202ENST00000367279 RPA3P35244 121 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-202ENST00000367279 ZNF568Q3ZCX4 644 aa13.02□□□□□ -0.33
PTPN7-202ENST00000367279 FKBP1CQ5VVH2 108 aa13.02□□□□□ -0.33
PTPN7-202ENST00000367279 GPAT2Q6NUI2 795 aa13.02□□□□□ -0.33
PTPN7-202ENST00000367279 CRELD2Q6UXH1 353 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-202ENST00000367279 SPOCD1Q6ZMY3 1216 aa13.02□□□□□ -0.33
PTPN7-202ENST00000367279 C15orf39Q6ZRI6 1047 aa13.02□□□□□ -0.33
PTPN7-202ENST00000367279 RCOR2Q8IZ40 523 aa13.02□□□□□ -0.33
PTPN7-202ENST00000367279 RSRC1Q96IZ7 334 aaKnown RBP13.02□□□□□ -0.33
PTPN7-202ENST00000367279 PCSK1NQ9UHG2 260 aa13.02□□□□□ -0.33
PTPN7-202ENST00000367279 OAS1P00973 400 aaKnown RBP13.01□□□□□ -0.33
PTPN7-202ENST00000367279 MYL6P60660 151 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 ATP11AP98196 1134 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 SPARCL1Q14515 664 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 CGB2Q6NT52 195 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 ERICH1Q86X53 443 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 RDM1Q8NG50 284 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 WRNIP1Q96S55 665 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 MAP3K20Q9NYL2 800 aaKnown RBP13.01□□□□□ -0.33
PTPN7-202ENST00000367279 KLRC2P26717 231 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 MSH2P43246 934 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 GAD2Q05329 585 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 MGAT5Q09328 741 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 BNIP1Q12981 228 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 EFTUD2Q15029 972 aaKnown RBP eCLIP13.01□□□□□ -0.33
PTPN7-202ENST00000367279 MTFR1Q15390 333 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 WLSQ5T9L3 541 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 PLEKHA7Q6IQ23 1121 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 CENPUQ71F23 418 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 AGBL3Q8NEM8 1001 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 MYLK2Q9H1R3 596 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 C12orf65Q9H3J6 166 aaKnown RBP13.01□□□□□ -0.33
PTPN7-202ENST00000367279 STK32BQ9NY57 414 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 HAO1Q9UJM8 370 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 TTLL13PA6NNM8 815 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 STBD1O95210 358 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 SUPT20HL2P0C7V6 817 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 TBXAS1P24557 533 aaPredicted RBP13.01□□□□□ -0.33
PTPN7-202ENST00000367279 PSMA2P25787 234 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 SSTR1P30872 391 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 SP2Q02086 613 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 EN1Q05925 392 aaPredicted RBP13.01□□□□□ -0.33
PTPN7-202ENST00000367279 TNFAIP1Q13829 316 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 BBS9Q3SYG4 887 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 SUPT20HL1Q3ZLR7 823 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
PTPN7-202ENST00000367279 SLFN12LQ6IEE8 588 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 THNSL1Q8IYQ7 743 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 PLCD4Q9BRC7 762 aa13.01□□□□□ -0.33
PTPN7-202ENST00000367279 EDN1P05305 212 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 OGDHQ02218 1023 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 FSTL1Q12841 308 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 TMEM63BQ5T3F8 832 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 ABHD15Q6UXT9 468 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 TRABD2AQ86V40 505 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 PHF13Q86YI8 300 aaPredicted RBP13□□□□□ -0.33
PTPN7-202ENST00000367279 RHPN2Q8IUC4 686 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 PYROXD1Q8WU10 500 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 RSAD2Q8WXG1 361 aa13□□□□□ -0.33
PTPN7-202ENST00000367279 CGRRF1Q99675 332 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms