RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 TLR9Q9NR96 1032 aa7.27□□□□□ -1.25
RNU1-55P-201ENST00000365510 KANSL3Q9P2N6 904 aa7.27□□□□□ -1.25
RNU1-55P-201ENST00000365510 SIX4Q9UIU6 781 aa7.27□□□□□ -1.25
RNU1-55P-201ENST00000365510 LUC7L2Q9Y383 392 aaKnown RBP7.27□□□□□ -1.25
RNU1-55P-201ENST00000365510 USP15Q9Y4E8 981 aaPredicted RBP7.27□□□□□ -1.25
RNU1-55P-201ENST00000365510 FHOD1Q9Y613 1164 aa7.27□□□□□ -1.25
RNU1-55P-201ENST00000365510 ANK1P16157 1881 aa7.27□□□□□ -1.25
RNU1-55P-201ENST00000365510 KIAA1671Q9BY89 1806 aa7.27□□□□□ -1.25
RNU1-55P-201ENST00000365510 PLXNA4Q9HCM2 1894 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 CASTOR2A6NHX0 329 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 TBKBP1A7MCY6 615 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 HIDE1A8MVS5 230 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 LOC730098B7Z3J9 87 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 EPHB6O15197 1021 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 OFD1O75665 1012 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 NOL4O94818 638 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 STAU1O95793 577 aaKnown RBP7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 RB1P06400 928 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 LRPAP1P30533 357 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 RPL9P32969 192 aaKnown RBP7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 GUCY2FP51841 1108 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 MFAP3P55082 362 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 MYL6P60660 151 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 YWHAEP62258 255 aaKnown RBP7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 TNNC1P63316 161 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 ZBED6P86452 979 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 GCNT1Q02742 428 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 LRMPQ12912 555 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 TBX2Q13207 712 aaPredicted RBP7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 TUSC3Q13454 348 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 SMAD4Q13485 552 aaKnown RBP7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 ZBTB6Q15916 424 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 SV2CQ496J9 727 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 ZNF667Q5HYK9 610 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 CLLU1OSQ5K130 101 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 SPOUT1Q5T280 376 aaKnown RBP7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 C9orf57Q5W0N0 161 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 IQCEQ6IPM2 695 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 CCDC186Q7Z3E2 898 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 CCDC112Q8NEF3 446 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 ST13P5Q8NFI4 369 aaPredicted RBP7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 LMO3Q8TAP4 145 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 CPLX3Q8WVH0 158 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 SEMA4DQ92854 862 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 DDX27Q96GQ7 796 aaKnown RBP7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 HPDLQ96IR7 371 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 FAXDC2Q96IV6 333 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 SAMD11Q96NU1 681 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 FAM193BQ96PV7 902 aaPredicted RBP7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 PI4K2AQ9BTU6 479 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 TLE6Q9H808 572 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 VRTNQ9H8Y1 702 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 SIX2Q9NPC8 291 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 ABHD10Q9NUJ1 306 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 TBC1D13Q9NVG8 400 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 ZNHIT6Q9NWK9 470 aaKnown RBP7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 PRKAG3Q9UGI9 489 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 MYO6Q9UM54 1294 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 CAPN11Q9UMQ6 739 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 AGAP1Q9UPQ3 857 aa7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 PDCD11Q14690 1871 aaKnown RBP7.26□□□□□ -1.25
RNU1-55P-201ENST00000365510 ANO9A1A5B4 782 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 ARHGEF37A1IGU5 675 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 LRRC53A6NM62 1247 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 NT5C1B-RDH14C9J2C7 533 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 F8VZ95 297 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 PODXLO00592 558 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 PIRO00625 290 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 LRRN2O75325 713 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 CCDC172P0C7W6 258 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 PAX3P23760 479 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 KRT9P35527 623 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 STAT1P42224 750 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 TAF6P49848 677 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 APBA1Q02410 837 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 SOX4Q06945 474 aaPredicted RBP7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 CUL2Q13617 745 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 SFMBT2Q5VUG0 894 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 PLPP4Q5VZY2 271 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 SMYD5Q6GMV2 418 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 SPOPLQ6IQ16 392 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 PHLDB3Q6NSJ2 640 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 PDXDC1Q6P996 788 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 GJB7Q6PEY0 223 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 SYCE2Q6PIF2 218 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 SCARA5Q6ZMJ2 495 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 RRAGAQ7L523 313 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 ARHGEF19Q8IW93 802 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 EFHBQ8N7U6 833 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 GSTCDQ8NEC7 633 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 OR8K1Q8NGG5 319 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 CXorf38Q8TB03 319 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 BAP1Q92560 729 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 JAKMIP2Q96AA8 810 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 TRIM44Q96DX7 344 aaPredicted RBP7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 PANX2Q96RD6 677 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 DNAJC7Q99615 494 aa7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 C11orf84Q9BUA3 381 aaPredicted RBP7.25□□□□□ -1.25
RNU1-55P-201ENST00000365510 STK33Q9BYT3 514 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms