RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 KRT71Q3SY84 523 aa2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 CT83Q5H943 113 aa2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 MUM1L1Q5H9M0 696 aa2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 WDR53Q7Z5U6 358 aaPredicted RBP2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 C11orf74Q86VG3 221 aa2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 FATE1Q969F0 183 aa2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 OSBPL9Q96SU4 736 aa2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 FOXP1Q9H334 677 aaPredicted RBP2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 GREM2Q9H772 168 aa2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 POT1Q9NUX5 634 aa2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 VSX1Q9NZR4 365 aaPredicted RBP2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 DPP7Q9UHL4 492 aa2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 ERRFI1Q9UJM3 462 aaPredicted RBP2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 RUVBL1Q9Y265 456 aaKnown RBP2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 SQORQ9Y6N5 450 aa2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 SPATA31A3Q5VYP0 1347 aa2.05□□□□□ -2.08
RNU4-11P-201ENST00000365287 H0YIZ8 118 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 QSOX1O00391 747 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 TRIAP1O43715 76 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 KPNA6O60684 536 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 AGFG2O95081 481 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 CHRM5P08912 532 aaPredicted RBP2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 POU3F2P20265 443 aaPredicted RBP2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 IL1R2P27930 398 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 CDKN2AP42771 156 aaKnown RBP2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 EEFSECP57772 596 aaKnown RBP2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 HOXA4Q00056 320 aaPredicted RBP2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 PDCD1Q15116 288 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 TBCCQ15814 346 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 ANO4Q32M45 955 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 CERKLQ49MI3 558 aaPredicted RBP2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 ZNF585BQ52M93 769 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 ZNF618Q5T7W0 954 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 TRIM72Q6ZMU5 477 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 RASSF3Q86WH2 238 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 FAM9AQ8IZU1 332 aaPredicted RBP2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 EAF2Q96CJ1 260 aaPredicted RBP2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 ACAP3Q96P50 834 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 GPR101Q96P66 508 aaPredicted RBP2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 TPSD1Q9BZJ3 242 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 C11orf54Q9H0W9 315 aaPredicted RBP2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 KLHL13Q9P2N7 655 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 DKK3Q9UBP4 350 aa2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 SCAF8Q9UPN6 1271 aaKnown RBP2.04□□□□□ -2.08
RNU4-11P-201ENST00000365287 LACTBL1A8MY62 500 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 H7C1Q1 480 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 FCHO1O14526 889 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 IGKV3-20P01619 116 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 PSG1P11464 419 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 ENPP1P22413 925 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 ALDH9A1P49189 494 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 MRPS9P82933 396 aaKnown RBP2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 ATP8B2P98198 1209 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 CDK17Q00537 523 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 PPP3CAQ08209 521 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 SART3Q15020 963 aaKnown RBP2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 BROXQ5VW32 411 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 TMPRSS12Q86WS5 348 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 RFX6Q8HWS3 928 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 CFAP52Q8N1V2 620 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 TSPEARQ8WU66 669 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 AUTS2Q8WXX7 1259 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 MKL1Q969V6 931 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 RITA1Q96K30 269 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 FAM84BQ96KN1 310 aaPredicted RBP2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 KLHL32Q96NJ5 620 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 ACTRT3Q9BYD9 372 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 GJB4Q9NTQ9 266 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 TRMT13Q9NUP7 481 aaKnown RBP2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 SPTLC3Q9NUV7 552 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 SELENONQ9NZV5 590 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 MCM8Q9UJA3 840 aa2.03□□□□□ -2.08
RNU4-11P-201ENST00000365287 FAM171A2A8MVW0 826 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 B4DGG1 531 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 POC1B-GALNT4F8VUJ3 575 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 DSCR3O14972 297 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 BRINP1O60477 761 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 EYA4O95677 639 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 AMY1AP04745 511 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 DDCP20711 480 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 SLC6A4P31645 630 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 SLC6A9P48067 706 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 NDUFV1P49821 464 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 NEK4P51957 841 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 CYP4F2P78329 520 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 MGAT2Q10469 447 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 PCID2Q5JVF3 399 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 UTP14CQ5TAP6 766 aaKnown RBP2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 MEX3CQ5U5Q3 659 aaKnown RBP2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 DAB2IPQ5VWQ8 1189 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 TAPT1Q6NXT6 567 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 ZNF813Q6ZN06 617 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 PIP4P1Q86T03 277 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 PIM3Q86V86 326 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 GALNT4Q8N4A0 578 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 KLHDC4Q8TBB5 520 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 DNASE2BQ8WZ79 361 aa2.02□□□□□ -2.09
RNU4-11P-201ENST00000365287 SLC5A5Q92911 643 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms