RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 HIDE1A8MVS5 230 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 ATP1A3P13637 1013 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 TRIM21P19474 475 aaKnown RBP14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 RFX1P22670 979 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 IRS1P35568 1242 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 ASPAP45381 313 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 CTXN3Q4LDR2 81 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 TPGS2Q68CL5 300 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 TRIM65Q6PJ69 517 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 Q7L0L9 218 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 ENOSF1Q7L5Y1 443 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 APTXQ7Z2E3 356 aaKnown RBP14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 UNC93AQ86WB7 457 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 HDAC7Q8WUI4 952 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 B3GALT6Q96L58 329 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 KLHL5Q96PQ7 755 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 CLSTN3Q9BQT9 956 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 INTS2Q9H0H0 1204 aaKnown RBP14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 APOBEC3GQ9HC16 384 aaKnown RBP14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 TAB2Q9NYJ8 693 aa14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 COL4A4P53420 1690 aaPredicted RBP14.8□□□□□ -0.04
NSMCE1-201ENST00000361439 PES1O00541 588 aaKnown RBP14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 C2CD2LO14523 706 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 TEX28O15482 410 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 CLSTN1O94985 981 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 CNPP09543 421 aaKnown RBP14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 FOSL2P15408 326 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 IGFBP4P22692 258 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 PON1P27169 355 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 GNL1P36915 607 aaPredicted RBP14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 INCA1Q0VD86 236 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 CUL2Q13617 745 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 RAB33AQ14088 237 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 DUSP6Q16828 381 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 ELMSAN1Q6PJG2 1045 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 KBTBD7Q8WVZ9 684 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 PI4K2AQ9BTU6 479 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 VPS16Q9H269 839 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 SNX25Q9H3E2 840 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 TLE6Q9H808 572 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 PLCB1Q9NQ66 1216 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 DDX43Q9NXZ2 648 aaKnown RBP14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 APEX2Q9UBZ4 518 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 FBXL5Q9UKA1 691 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 CDH9Q9ULB4 789 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 BARX2Q9UMQ3 279 aaPredicted RBP14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 STXBP5LQ9Y2K9 1186 aa14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 TIMM13Q9Y5L4 95 aaPredicted RBP14.79□□□□□ -0.04
NSMCE1-201ENST00000361439 A0A1B0GTH6 734 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 SERPINC1P01008 464 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 TPM3P06753 285 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 KLRC2P26717 231 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 CA8P35219 290 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 TSPY1Q01534 308 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 UBXN1Q04323 297 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 GPR17Q13304 367 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 MAPRE1Q15691 268 aaKnown RBP14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 SPOPLQ6IQ16 392 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 PRSS55Q6UWB4 352 aaPredicted RBP14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 TMEM184AQ6ZMB5 413 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 DCP1BQ8IZD4 617 aaKnown RBP14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 ZNF461Q8TAF7 563 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 C2orf15Q8WU43 125 aaKnown RBP14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 AUTS2Q8WXX7 1259 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 MYLIPQ8WY64 445 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 TNIP3Q96KP6 325 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 ERGIC2Q96RQ1 377 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 ZCWPW1Q9H0M4 648 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 RTN4Q9NQC3 1192 aaKnown RBP14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 HSFX1Q9UBD0 423 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 POLIQ9UNA4 740 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 CDY1Q9Y6F8 540 aa14.78□□□□□ -0.04
NSMCE1-201ENST00000361439 VWA8A3KMH1 1905 aa14.77□□□□□ -0.04
NSMCE1-201ENST00000361439 A0A1W2PQC6 194 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 CLASP2O75122 1294 aaKnown RBP14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 ABLIM3O94929 683 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 GLUD1P00367 558 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 SRGAP2BP0DMP2 458 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 OR1D2P34982 312 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 CLCN4P51793 760 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 FANCCQ00597 558 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 COL19A1Q14993 1142 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 NFE2Q16621 373 aaPredicted RBP14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 UVSSAQ2YD98 709 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 TCEAL5Q5H9L2 206 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 LILRA6Q6PI73 481 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 PPM1KQ8N3J5 372 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 EFHBQ8N7U6 833 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 OR6B3Q8NGW1 331 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 TATDN2Q93075 761 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 RTP3Q9BQQ7 232 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 MRPL45Q9BRJ2 306 aaKnown RBP14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 CRACR2AQ9BSW2 395 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 PLEKHA4Q9H4M7 779 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 SMYD3Q9H7B4 428 aa14.77□□□□□ -0.05
NSMCE1-201ENST00000361439 PRRC2BQ5JSZ5 2229 aaKnown RBP14.76□□□□□ -0.05
NSMCE1-201ENST00000361439 A8MXQ7 604 aa14.76□□□□□ -0.05
NSMCE1-201ENST00000361439 LRRN2O75325 713 aa14.76□□□□□ -0.05
NSMCE1-201ENST00000361439 CILPO75339 1184 aa14.76□□□□□ -0.05
NSMCE1-201ENST00000361439 WEE2P0C1S8 567 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms