RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 SLC9A2Q9UBY0 812 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 ASIC3Q9UHC3 531 aa9.62□□□□□ -0.87
TOP1-201ENST00000361337 R3HDM2Q9Y2K5 976 aaKnown RBP9.62□□□□□ -0.87
TOP1-201ENST00000361337 FER1L6Q2WGJ9 1857 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 CYP26A1O43174 497 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 SPAG7O75391 227 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 C6orf222P0C671 652 aaPredicted RBP9.61□□□□□ -0.87
TOP1-201ENST00000361337 IVDP26440 423 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 YWHABP31946 246 aaKnown RBP9.61□□□□□ -0.87
TOP1-201ENST00000361337 ITGA8P53708 1063 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 GPC5P78333 572 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 PDCD2Q16342 344 aaPredicted RBP9.61□□□□□ -0.87
TOP1-201ENST00000361337 EPC2Q52LR7 807 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 C6orf163Q5TEZ5 329 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 FKBP1CQ5VVH2 108 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 CYP4F22Q6NT55 531 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 SPATA24Q86W54 205 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 RHOT2Q8IXI1 618 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 TAB3Q8N5C8 712 aaPredicted RBP9.61□□□□□ -0.87
TOP1-201ENST00000361337 C9orf72Q96LT7 481 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 WDR18Q9BV38 432 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 HAO1Q9UJM8 370 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 FAF1Q9UNN5 650 aaPredicted RBP9.61□□□□□ -0.87
TOP1-201ENST00000361337 LZTS1Q9Y250 596 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 PCDHA10Q9Y5I2 948 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 C10orf71Q711Q0 1435 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 MYL3P08590 195 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 TAC1P20366 129 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 YY1P25490 414 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 WDR4P57081 412 aaKnown RBP9.61□□□□□ -0.87
TOP1-201ENST00000361337 ZNF280AP59817 542 aaPredicted RBP9.61□□□□□ -0.87
TOP1-201ENST00000361337 BFSP1Q12934 665 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 PPP2R5EQ16537 467 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 CYP1B1Q16678 543 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 NBPF20Q3BBV1 942 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 ZNF394Q53GI3 561 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 RHBDF2Q6PJF5 856 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 CCHCR1Q8TD31 782 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 NUDCD1Q96RS6 583 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 SLC38A10Q9HBR0 1119 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 DMAC2Q9NW81 257 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 GRID1Q9ULK0 1009 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 NAALADL1Q9UQQ1 740 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 NUMBLQ9Y6R0 609 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 PASKQ96RG2 1323 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 P4HBP07237 508 aaKnown RBP9.61□□□□□ -0.87
TOP1-201ENST00000361337 CTSHP09668 335 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 DESP17661 470 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 CALCOCO2Q13137 446 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 DNAJC3Q13217 504 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 MAP7Q14244 749 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 Q4G0T1 1027 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 C1orf220Q5T0J3 134 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 ZNF564Q8TBZ8 553 aaPredicted RBP9.61□□□□□ -0.87
TOP1-201ENST00000361337 ERP27Q96DN0 273 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 HSD17B14Q9BPX1 270 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 NINJ2Q9NZG7 142 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 SMCHD1A6NHR9 2005 aa9.61□□□□□ -0.87
TOP1-201ENST00000361337 DENND3A2RUS2 1198 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 MIF4GDA9UHW6 222 aaKnown RBP9.6□□□□□ -0.87
TOP1-201ENST00000361337 PIAS1O75925 651 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 UNC5CO95185 931 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 PSAPP07602 524 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 STAT5BP51692 787 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 SEPT6Q14141 434 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 TTC8Q8TAM2 541 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 EPS8L1Q8TE68 723 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 NLRP7Q8WX94 980 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 CBWD1Q9BRT8 395 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 HEMGNQ9BXL5 484 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 ZNF302Q9NR11 478 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 BTBD7Q9P203 1132 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 SNCAIPQ9Y6H5 919 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 CBX6O95503 412 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 TTC4O95801 387 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 SREBF1P36956 1147 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 FSTL1Q12841 308 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 SGO2Q562F6 1265 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 USP50Q70EL3 339 aaPredicted RBP9.6□□□□□ -0.87
TOP1-201ENST00000361337 PSPC1Q8WXF1 523 aaKnown RBP9.6□□□□□ -0.87
TOP1-201ENST00000361337 SLC5A5Q92911 643 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 LENG1Q96BZ8 264 aaPredicted RBP9.6□□□□□ -0.87
TOP1-201ENST00000361337 KREMEN1Q96MU8 473 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 PDGFCQ9NRA1 345 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 NRBP2Q9NSY0 501 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 PARP2Q9UGN5 583 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 NOCTQ9UK39 431 aaKnown RBP9.6□□□□□ -0.87
TOP1-201ENST00000361337 CHKBQ9Y259 395 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 K7ERI5 159 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 THAP12O43422 761 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 SUPT3HO75486 399 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 ZNF189O75820 626 aaPredicted RBP9.6□□□□□ -0.87
TOP1-201ENST00000361337 CCNB1P14635 433 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 ALDH3A1P30838 453 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 BTKQ06187 659 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 BLMHQ13867 455 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 ACBD5Q5T8D3 534 aaPredicted RBP9.6□□□□□ -0.87
TOP1-201ENST00000361337 CATSPERGQ6ZRH7 1159 aa9.6□□□□□ -0.87
TOP1-201ENST00000361337 DHX38Q92620 1227 aaKnown RBP9.6□□□□□ -0.87
TOP1-201ENST00000361337 SERPINB12Q96P63 405 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms