RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ABHD17CQ6PCB6 329 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 FAM160B2Q86V87 743 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 DNAAF5Q86Y56 855 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 KSR1Q8IVT5 923 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 IQCKQ8N0W5 287 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 MREGQ8N565 214 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 GOLGA6L1Q8N7Z2 621 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 MORC4Q8TE76 937 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 KRT12Q99456 494 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 ZNF577Q9BSK1 485 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 EPB41L5Q9HCM4 733 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 AGPAT3Q9NRZ7 376 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 TMOD2Q9NZR1 351 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 CWC15Q9P013 229 aaKnown RBP7.87□□□□□ -1.15
CLCN3-202ENST00000360642 PGAP2Q9UHJ9 254 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 ZSCAN5CA6NGD5 496 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-202ENST00000360642 GOLGA8KD6RF30 607 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 KCNK3O14649 394 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 GABRDO14764 452 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 SOX5P35711 763 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 STAT1P42224 750 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 HSD17B4P51659 736 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 UBXN2AP68543 259 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 PRR20EP86478 221 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 PRR20CP86479 221 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 PRR20DP86480 221 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 PRR20BP86481 221 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 PRR20AP86496 221 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 MAPK7Q13164 816 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 CBWD6Q4V339 395 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 CBWD3Q5JTY5 395 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 CBWD5Q5RIA9 395 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 FKBP1CQ5VVH2 108 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 LDHDQ86WU2 507 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 DAW1Q8N136 415 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 RASGEF1CQ8N431 466 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 EIF1ADQ8N9N8 165 aaKnown RBP7.87□□□□□ -1.15
CLCN3-202ENST00000360642 LNX1Q8TBB1 728 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-202ENST00000360642 CASKIN2Q8WXE0 1202 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 TRERF1Q96PN7 1200 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 RIT2Q99578 217 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 MKRN2Q9H000 416 aaKnown RBP7.87□□□□□ -1.15
CLCN3-202ENST00000360642 PLEKHA4Q9H4M7 779 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 ATP13A2Q9NQ11 1180 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 MCM8Q9UJA3 840 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 FEM1BQ9UK73 627 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 ZNF214Q9UL59 606 aaPredicted RBP7.87□□□□□ -1.15
CLCN3-202ENST00000360642 NFU1Q9UMS0 254 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 PCDHA9Q9Y5H5 950 aa7.87□□□□□ -1.15
CLCN3-202ENST00000360642 GOLGA6CA6NDK9 693 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 IPO5O00410 1097 aaKnown RBP7.86□□□□□ -1.15
CLCN3-202ENST00000360642 RAD51CO43502 376 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 MT-CO1P00395 513 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 H2AFZP0C0S5 128 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 GOLGA6DP0CG33 693 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 BCRP11274 1271 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 ITGB5P18084 799 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 DNA2P51530 1060 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 GUCY2DQ02846 1103 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 MYBPC2Q14324 1141 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 FAM153CQ494X1 144 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 H2AFVQ71UI9 128 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 VPS36Q86VN1 386 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 RPTORQ8N122 1335 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 CNTD1Q8N815 330 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 OR6P1Q8NGX9 317 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 LMO3Q8TAP4 145 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 FAM76AQ8TAV0 307 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 MXRA8Q9BRK3 442 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 LXNQ9BS40 222 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 TEKT3Q9BXF9 490 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 MS4A5Q9H3V2 200 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 GOLPH3Q9H4A6 298 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 GOLGA6AQ9NYA3 693 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-202ENST00000360642 SUCLA2Q9P2R7 463 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-202ENST00000360642 FAM153AQ9UHL3 310 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 SCAF8Q9UPN6 1271 aaKnown RBP7.86□□□□□ -1.15
CLCN3-202ENST00000360642 COL4A5P29400 1685 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 ZNF536O15090 1300 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 C6orf222P0C671 652 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-202ENST00000360642 CAP2P40123 477 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 GHRHRQ02643 423 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 PPFIA1Q13136 1202 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 DLGAP5Q15398 846 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 FOXR1Q6PIV2 292 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 STXBP4Q6ZWJ1 553 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 NT5DC3Q86UY8 548 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 METTL13Q8N6R0 699 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 C19orf47Q8N9M1 422 aaKnown RBP7.86□□□□□ -1.15
CLCN3-202ENST00000360642 NEK9Q8TD19 979 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.86□□□□□ -1.15
CLCN3-202ENST00000360642 TAF4BQ92750 862 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 HES6Q96HZ4 224 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 ZIM3Q96PE6 472 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 FBXO28Q9NVF7 368 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 DNAJC12Q9UKB3 198 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 DAAM1Q9Y4D1 1078 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 LOXHD1Q8IVV2 1947 aa7.86□□□□□ -1.15
CLCN3-202ENST00000360642 RGPD3A6NKT7 1758 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms