RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 CTCFP49711 727 aaPredicted RBP17.15■□□□□ 0.34
SCAF1-201ENST00000360565 KDSRQ06136 332 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 CLEC16AQ2KHT3 1053 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 BTNL9Q6UXG8 535 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 AGR3Q8TD06 166 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 PGBD4Q96DM1 585 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 HPDLQ96IR7 371 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 PIN4Q9Y237 131 aaKnown RBP17.15■□□□□ 0.34
SCAF1-201ENST00000360565 KPNA7A9QM74 516 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 ARSHQ5FYA8 562 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 MYLK4Q86YV6 388 aaPredicted RBP17.15■□□□□ 0.34
SCAF1-201ENST00000360565 RIBC1Q8N443 379 aaPredicted RBP17.15■□□□□ 0.34
SCAF1-201ENST00000360565 CEP120Q8N960 986 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 EXT2Q93063 718 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 TNIP3Q96KP6 325 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 SERPINI1Q99574 410 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 WDR18Q9BV38 432 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 HBP1O60381 514 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 KCTD19Q17RG1 926 aaPredicted RBP17.14■□□□□ 0.33
SCAF1-201ENST00000360565 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
SCAF1-201ENST00000360565 CCDC124Q96CT7 223 aaKnown RBP17.14■□□□□ 0.33
SCAF1-201ENST00000360565 WWP1Q9H0M0 922 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.14■□□□□ 0.33
SCAF1-201ENST00000360565 ADAMTS3O15072 1205 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 PPP1R11O60927 126 aaPredicted RBP17.14■□□□□ 0.33
SCAF1-201ENST00000360565 MAPTP10636 758 aaKnown RBP17.14■□□□□ 0.33
SCAF1-201ENST00000360565 RPS12P25398 132 aaKnown RBP17.14■□□□□ 0.33
SCAF1-201ENST00000360565 CLCN3P51790 818 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 MYL6P60660 151 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 STILQ15468 1287 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 KYAT1Q16773 422 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 FAXCQ5TGI0 409 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 TEX2Q8IWB9 1127 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 PPIL6Q8IXY8 311 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 MCOLN2Q8IZK6 566 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 ETNPPLQ8TBG4 499 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 ZNF560Q96MR9 790 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 IGF2BP3O00425 579 aaKnown RBP eCLIP17.14■□□□□ 0.33
SCAF1-201ENST00000360565 MAGEB2O15479 319 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 IL18RAPO95256 599 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 TTC4O95801 387 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 RARBP10826 455 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 KRT4P19013 534 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 POLE2P56282 527 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 COBLL1Q53SF7 1204 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 AADACL2Q6P093 401 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 SCFD2Q8WU76 684 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 PAK5Q9P286 719 aa17.14■□□□□ 0.33
SCAF1-201ENST00000360565 ARHGEF37A1IGU5 675 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 TRPA1O75762 1119 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 TM4SF1P30408 202 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 TTMPQ5BVD1 217 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 IRF2BP2Q7Z5L9 587 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 ATP6V1E2Q96A05 226 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 TMEM121Q9BTD3 319 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 FSD1LQ9BXM9 530 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 IKZF4Q9H2S9 585 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 PPCSQ9HAB8 311 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 ERAP1Q9NZ08 941 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 PMLP29590 882 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 CYB5D1Q6P9G0 228 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 DDX27Q96GQ7 796 aaKnown RBP17.13■□□□□ 0.33
SCAF1-201ENST00000360565 INPP4AQ96PE3 977 aaPredicted RBP17.13■□□□□ 0.33
SCAF1-201ENST00000360565 TRIM4Q9C037 500 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 WNT10BO00744 389 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 CCDC22O60826 627 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 GPD1P21695 349 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 PGM1P36871 562 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 IFI35P80217 286 aaPredicted RBP17.13■□□□□ 0.33
SCAF1-201ENST00000360565 OCRLQ01968 901 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 POU5F1BQ06416 359 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 FSCBQ5H9T9 825 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 MDH1BQ5I0G3 518 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 C3orf20Q8ND61 904 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 CGRRF1Q99675 332 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 HSD17B14Q9BPX1 270 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 KIAA1683Q9H0B3 1180 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 RANBP17Q9H2T7 1088 aaKnown RBP17.13■□□□□ 0.33
SCAF1-201ENST00000360565 CISHQ9NSE2 258 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 ATP8B3O60423 1300 aa17.13■□□□□ 0.33
SCAF1-201ENST00000360565 GNAT1P11488 350 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 CCNG2Q16589 344 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 TFDP3Q5H9I0 405 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 TRIM67Q6ZTA4 783 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 ABRAQ8N0Z2 381 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 EMC1Q8N766 993 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 DTX3LQ8TDB6 740 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 EPS8L1Q8TE68 723 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 PCMTD2Q9NV79 361 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 ANKRD63C9JTQ0 380 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 TLR2O60603 784 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 OTUD4Q01804 1114 aaKnown RBP17.12■□□□□ 0.33
SCAF1-201ENST00000360565 KLC3Q6P597 504 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 EXD1Q8NHP7 514 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 LNX1Q8TBB1 728 aaPredicted RBP17.12■□□□□ 0.33
SCAF1-201ENST00000360565 DYNC1LI2O43237 492 aaPredicted RBP17.12■□□□□ 0.33
SCAF1-201ENST00000360565 MOCS2O96007 188 aaPredicted RBP17.12■□□□□ 0.33
SCAF1-201ENST00000360565 ENO1P06733 434 aaKnown RBP17.12■□□□□ 0.33
SCAF1-201ENST00000360565 AKT1S1Q96B36 256 aa17.12■□□□□ 0.33
SCAF1-201ENST00000360565 FAM96AQ9H5X1 160 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms