RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 SCN5AQ14524 2016 aa24.68■■□□□ 1.54
SDF4-202ENST00000360001 ENC1O14682 589 aa24.68■■□□□ 1.54
SDF4-202ENST00000360001 INPPL1O15357 1258 aa24.68■■□□□ 1.54
SDF4-202ENST00000360001 EOMESO95936 686 aa24.68■■□□□ 1.54
SDF4-202ENST00000360001 NOP2P46087 812 aaKnown RBP24.68■■□□□ 1.54
SDF4-202ENST00000360001 SLC35G2Q8TBE7 412 aa24.68■■□□□ 1.54
SDF4-202ENST00000360001 PCDHGC3Q9UN70 934 aa24.68■■□□□ 1.54
SDF4-202ENST00000360001 TDRD15B5MCY1 1934 aaKnown RBP24.68■■□□□ 1.54
SDF4-202ENST00000360001 GRID2IPA4D2P6 1211 aa24.67■■□□□ 1.54
SDF4-202ENST00000360001 PALMO75781 387 aa24.67■■□□□ 1.54
SDF4-202ENST00000360001 POMCP01189 267 aa24.67■■□□□ 1.54
SDF4-202ENST00000360001 ATP1A1P05023 1023 aaKnown RBP24.67■■□□□ 1.54
SDF4-202ENST00000360001 CD19P15391 556 aa24.67■■□□□ 1.54
SDF4-202ENST00000360001 SCLYQ96I15 445 aa24.67■■□□□ 1.54
SDF4-202ENST00000360001 WNT8AQ9H1J5 351 aa24.67■■□□□ 1.54
SDF4-202ENST00000360001 OSGEPQ9NPF4 335 aa24.67■■□□□ 1.54
SDF4-202ENST00000360001 NME7Q9Y5B8 376 aa24.67■■□□□ 1.54
SDF4-202ENST00000360001 IGFBP6P24592 240 aaPredicted RBP24.67■■□□□ 1.54
SDF4-202ENST00000360001 TCEAL1Q15170 157 aa24.67■■□□□ 1.54
SDF4-202ENST00000360001 IFI16Q16666 785 aaKnown RBP24.67■■□□□ 1.54
SDF4-202ENST00000360001 TPCN2Q8NHX9 752 aa24.67■■□□□ 1.54
SDF4-202ENST00000360001 INPP5FQ9Y2H2 1132 aa24.67■■□□□ 1.54
SDF4-202ENST00000360001 JRKLQ9Y4A0 524 aa24.67■■□□□ 1.54
SDF4-202ENST00000360001 KIAA0100Q14667 2235 aaKnown RBP24.67■■□□□ 1.54
SDF4-202ENST00000360001 NSFP46459 744 aaKnown RBP24.66■■□□□ 1.54
SDF4-202ENST00000360001 CLCNKBP51801 687 aa24.66■■□□□ 1.54
SDF4-202ENST00000360001 GRIK3Q13003 919 aa24.66■■□□□ 1.54
SDF4-202ENST00000360001 TCTN1Q2MV58 587 aa24.66■■□□□ 1.54
SDF4-202ENST00000360001 KBTBD7Q8WVZ9 684 aa24.66■■□□□ 1.54
SDF4-202ENST00000360001 SEPT8Q92599 483 aa24.66■■□□□ 1.54
SDF4-202ENST00000360001 NT5C1AQ9BXI3 368 aa24.66■■□□□ 1.54
SDF4-202ENST00000360001 GTF3C4Q9UKN8 822 aa24.66■■□□□ 1.54
SDF4-202ENST00000360001 COG5Q9UP83 839 aa24.66■■□□□ 1.54
SDF4-202ENST00000360001 PODXLO00592 558 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 ATMINO43313 823 aaPredicted RBP24.65■■□□□ 1.54
SDF4-202ENST00000360001 LSM8O95777 96 aaKnown RBP24.65■■□□□ 1.54
SDF4-202ENST00000360001 CYP1A2P05177 515 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 RPL9P32969 192 aaKnown RBP24.65■■□□□ 1.54
SDF4-202ENST00000360001 CCL23P55773 120 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 AMPD2Q01433 879 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 RHOT2Q8IXI1 618 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 MCOLN2Q8IZK6 566 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 LRRC57Q8N9N7 239 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 ZNF653Q96CK0 615 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 PPP1R12CQ9BZL4 782 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 TBX21Q9UL17 535 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 L1RE1Q9UN81 338 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 CASTOR2A6NHX0 329 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 ENPP3O14638 875 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 MED7O43513 233 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 VDRP11473 427 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 CLLU1OSQ5K130 101 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 PAPD7Q5XG87 772 aaKnown RBP24.65■■□□□ 1.54
SDF4-202ENST00000360001 MON1BQ7L1V2 547 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 PAWRQ96IZ0 340 aaKnown RBP24.65■■□□□ 1.54
SDF4-202ENST00000360001 HEXIM2Q96MH2 286 aaKnown RBP24.65■■□□□ 1.54
SDF4-202ENST00000360001 PAAF1Q9BRP4 392 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 C11orf49Q9H6J7 331 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 ATP11BQ9Y2G3 1177 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 MRFAP1Q9Y605 127 aa24.65■■□□□ 1.54
SDF4-202ENST00000360001 CXCL10P02778 98 aa24.64■■□□□ 1.54
SDF4-202ENST00000360001 FGFR1P11362 822 aa24.64■■□□□ 1.54
SDF4-202ENST00000360001 CDH5P33151 784 aaPredicted RBP24.64■■□□□ 1.54
SDF4-202ENST00000360001 CYP2C18P33260 490 aa24.64■■□□□ 1.54
SDF4-202ENST00000360001 HADHBP55084 474 aaKnown RBP24.64■■□□□ 1.54
SDF4-202ENST00000360001 UPP1Q16831 310 aa24.64■■□□□ 1.54
SDF4-202ENST00000360001 FAM43BQ6ZT52 329 aaPredicted RBP24.64■■□□□ 1.54
SDF4-202ENST00000360001 UNC93AQ86WB7 457 aa24.64■■□□□ 1.54
SDF4-202ENST00000360001 PHF13Q86YI8 300 aaPredicted RBP24.64■■□□□ 1.54
SDF4-202ENST00000360001 C3orf58Q8NDZ4 430 aa24.64■■□□□ 1.54
SDF4-202ENST00000360001 APPL2Q8NEU8 664 aa24.64■■□□□ 1.54
SDF4-202ENST00000360001 APBB2Q92870 758 aa24.64■■□□□ 1.54
SDF4-202ENST00000360001 CHORDC1Q9UHD1 332 aaPredicted RBP24.64■■□□□ 1.54
SDF4-202ENST00000360001 DENND1BQ6P3S1 775 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 GLB1LQ6UWU2 654 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 WDTC1Q8N5D0 677 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 TOP6BLQ8N6T0 577 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 RABGGTAQ92696 567 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 ZNF518BQ9C0D4 1074 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 TMEM161AQ9NX61 479 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 KIAA1257Q9ULG3 409 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 HUS1O60921 280 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 PARNO95453 639 aaKnown RBP24.63■■□□□ 1.53
SDF4-202ENST00000360001 PTP4A2Q12974 167 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 TUSC3Q13454 348 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 PPP1R2P3Q6NXS1 205 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 DPH6Q7L8W6 267 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 TMEM35BQ8NCS4 154 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 C1orf131Q8NDD1 294 aaKnown RBP24.63■■□□□ 1.53
SDF4-202ENST00000360001 OR6B3Q8NGW1 331 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 LHX5Q9H2C1 402 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 CTTNBP2NLQ9P2B4 639 aa24.63■■□□□ 1.53
SDF4-202ENST00000360001 CNOT8Q9UFF9 292 aaKnown RBP24.63■■□□□ 1.53
SDF4-202ENST00000360001 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.63■■□□□ 1.53
SDF4-202ENST00000360001 O00370 1275 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 CYB561D2O14569 222 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 MTA2O94776 668 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 FTCDO95954 541 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 MYBL1P10243 752 aa24.62■■□□□ 1.53
SDF4-202ENST00000360001 CNGA2Q16280 664 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms