RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PADI6Q6TGC4 694 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 CCDC81Q6ZN84 652 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 TMEM237Q96Q45 408 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 TMEM120AQ9BXJ8 343 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 ADAM33Q9BZ11 813 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 RAB6BQ9NRW1 208 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 PCSK1NQ9UHG2 260 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 SORBS3O60504 671 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 USP17L8P0C7I0 530 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 GYS1P13807 737 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 ATP6V1C1P21283 382 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 COMTP21964 271 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 ACTR2P61160 394 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 C6orf10Q5SRN2 563 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 STOX1Q6ZVD7 989 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 ILKAPQ9H0C8 392 aaPredicted RBP9.15□□□□□ -0.94
COL6A6-201ENST00000358511 TFR2Q9UP52 801 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 SNX13Q9Y5W8 968 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 KANSL1LA0AUZ9 987 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 MYO1GB0I1T2 1018 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 STX7O15400 261 aaKnown RBP9.15□□□□□ -0.94
COL6A6-201ENST00000358511 JAK1P23458 1154 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 EPHB2P29323 1055 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 TP53BP2Q13625 1128 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 HEATR4Q86WZ0 1026 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 TMPRSS6Q8IU80 811 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 NDUFAF2Q8N183 169 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 CEP44Q9C0F1 390 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 EFCAB1Q9HAE3 211 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 AS3MTQ9HBK9 375 aa9.15□□□□□ -0.94
COL6A6-201ENST00000358511 CNOT7Q9UIV1 285 aaKnown RBP9.15□□□□□ -0.94
COL6A6-201ENST00000358511 R3HDM2Q9Y2K5 976 aaKnown RBP9.15□□□□□ -0.94
COL6A6-201ENST00000358511 C1orf232A0A0U1RR37 186 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 DGKIO75912 1065 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 THRAP10827 490 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 KCNA2P16389 499 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 OVGP1Q12889 678 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 MEI1Q5TIA1 1274 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 LRRC8DQ7L1W4 858 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 C19orf60Q96EN9 201 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 LMCD1Q9NZU5 365 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 DMGDHQ9UI17 866 aaKnown RBP9.15□□□□□ -0.95
COL6A6-201ENST00000358511 PDZK1P1A8MUH7 402 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 FAM25AB3EWG3 89 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 FAM25CB3EWG5 89 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 FAM25GB3EWG6 89 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 TBC1D12O60347 775 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 TOMM70O94826 608 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 BMP3P12645 472 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 UBXN2AP68543 259 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 MIGA2Q7L4E1 593 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 SZRD1Q7Z422 152 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 RAD21L1Q9H4I0 556 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 PIH1D3Q9NQM4 214 aaKnown RBP9.15□□□□□ -0.95
COL6A6-201ENST00000358511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.15□□□□□ -0.95
COL6A6-201ENST00000358511 DUSP10Q9Y6W6 482 aa9.15□□□□□ -0.95
COL6A6-201ENST00000358511 RNF103O00237 685 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 SERPINB5P36952 375 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 LAMC2Q13753 1193 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 NDUFA5Q16718 116 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 CENPPQ6IPU0 288 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 IYDQ6PHW0 289 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 SH3GLB1Q9Y371 365 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 HOXA13P31271 388 aaPredicted RBP9.14□□□□□ -0.95
COL6A6-201ENST00000358511 ITGB3BPQ13352 177 aaPredicted RBP9.14□□□□□ -0.95
COL6A6-201ENST00000358511 XRCC4Q13426 336 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 USPL1Q5W0Q7 1092 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 PHF21AQ96BD5 680 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 RMDN1Q96DB5 314 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 ZSWIM1Q9BR11 485 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 TRIM45Q9H8W5 580 aaPredicted RBP9.14□□□□□ -0.95
COL6A6-201ENST00000358511 USE1Q9NZ43 259 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 FAM32AQ9Y421 112 aaKnown RBP9.14□□□□□ -0.95
COL6A6-201ENST00000358511 ALG6Q9Y672 507 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 EIF2S1P05198 315 aaKnown RBP9.14□□□□□ -0.95
COL6A6-201ENST00000358511 MARK2Q7KZI7 788 aaKnown RBP9.14□□□□□ -0.95
COL6A6-201ENST00000358511 FAR2Q96K12 515 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 PAIP1Q9H074 479 aaKnown RBP9.14□□□□□ -0.95
COL6A6-201ENST00000358511 MYLK2Q9H1R3 596 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 TASP1Q9H6P5 420 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 MAP10Q9P2G4 905 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 SMIM31A0A1B0GVY4 71 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 POLBP06746 335 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 CIITAP33076 1130 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 SPRP35270 261 aaPredicted RBP9.14□□□□□ -0.95
COL6A6-201ENST00000358511 P3H2Q8IVL5 708 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 AGAP11Q8TF27 550 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 MCRS1Q96EZ8 462 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 CDC42EP4Q9H3Q1 356 aaKnown RBP9.14□□□□□ -0.95
COL6A6-201ENST00000358511 KLHL11Q9NVR0 708 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 DCDC2Q9UHG0 476 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 LEMD3Q9Y2U8 911 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 MYO1DO94832 1006 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 WEE2P0C1S8 567 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 CHN2P52757 468 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 NPEPPSP55786 919 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 GSTA3Q16772 222 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 EAPPQ56P03 285 aaPredicted RBP9.14□□□□□ -0.95
COL6A6-201ENST00000358511 C12orf60Q5U649 245 aa9.14□□□□□ -0.95
COL6A6-201ENST00000358511 DCAF4Q8WV16 495 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms