RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 ST14Q9Y5Y6 855 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 NFS1Q9Y697 457 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 PAX3P23760 479 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ZNF543Q08ER8 600 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TTC30AQ86WT1 665 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ANKRD13CQ8N6S4 541 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TSEN2Q8NCE0 465 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 FNIP1Q8TF40 1166 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 CASP10Q92851 521 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.3□□□□□ -1.723e-8■■■■■ 70.6
SYNE2-204ENST00000358025 CNBD2Q96M20 576 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 SNX24Q9Y343 169 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 HBS1LQ9Y450 684 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 DUSP10Q9Y6W6 482 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 CD163L1Q9NR16 1453 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ATRNO75882 1429 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ATP9AO75110 1047 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 RALBP11234 206 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 PHEXP78562 749 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TBCBQ99426 244 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ANO3Q9BYT9 981 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 C2CD2Q9Y426 696 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 SERPINE1P05121 402 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 FUT2Q10981 343 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 CASC4Q6P4E1 433 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 CLNKQ7Z7G1 428 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 COX4I2Q96KJ9 171 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 RMDN3Q96TC7 470 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 INTS2Q9H0H0 1204 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 CYP3A43Q9HB55 503 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 XDHP47989 1333 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 PRPSAP2O60256 369 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 NMT2O60551 498 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 MSLNQ13421 630 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 RNF207Q6ZRF8 634 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 CALML6Q8TD86 181 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 OSBPL7Q9BZF2 842 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 NPPAP01160 153 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 RFC4P35249 363 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 DYMQ7RTS9 669 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 UNC5BQ8IZJ1 945 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 CHCHD4Q8N4Q1 142 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 SNRNP27Q8WVK2 155 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 NDNQ99608 321 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TLE6Q9H808 572 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TMEM8AQ9HCN3 771 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 NRBP2Q9NSY0 501 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 HERC5Q9UII4 1024 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TCRBV5S4A2TA0A5A2 114 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 KATNAL2Q8IYT4 538 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 OTUD5Q96G74 571 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 DUSP9Q99956 384 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 FAM217BQ9NTX9 383 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 H7C0C1 242 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 MAP3K13O43283 966 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 FAM153BP0C7A2 387 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 SREBF1P36956 1147 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ATP5OP48047 213 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 MKRN4PQ13434 485 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 FAM153CQ494X1 144 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 USHBP1Q8N6Y0 703 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 C9orf16Q9BUW7 83 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 SEMA4AQ9H3S1 761 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ST6GALNAC4Q9H4F1 302 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 BFARQ9NZS9 450 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TUBGCP4Q9UGJ1 667 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ZMYND8Q9ULU4 1186 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 KIF20BQ96Q89 1820 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 CIITAP33076 1130 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TTMPQ5BVD1 217 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 DEPTORQ8TB45 409 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TUBGCP5Q96RT8 1024 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ROBO2Q9HCK4 1378 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 KRT76Q01546 638 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 FLOT2Q14254 428 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 EPHA10Q5JZY3 1008 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 KIAA1841Q6NSI8 718 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 RSBN1LQ6PCB5 846 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ZNF554Q86TJ5 538 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 HORMAD1Q86X24 394 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 C7orf26Q96N11 449 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 AIFM3Q96NN9 605 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 CLTCQ00610 1675 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 CHEK2O96017 543 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 BCAMP50895 628 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 LSAMPQ13449 338 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ERICH1Q86X53 443 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 C12orf50Q8NA57 414 aaPredicted RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 PRPF18Q99633 342 aaKnown RBP4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ZC4H2Q9NQZ6 224 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 HEY2Q9UBP5 337 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 L3MBTL1Q9Y468 752 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 MROH2AA6NES4 1674 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 C15orf38-AP3S2A0A0A6YYH1 394 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 TM7SF2O76062 418 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 IFNB1P01574 187 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ABCB4P21439 1286 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 ARSEP51690 589 aa4.3□□□□□ -1.72
SYNE2-204ENST00000358025 NFX1Q12986 1120 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms