RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 VAMP7P51809 220 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 MFAP3P55082 362 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 FKBP1BP68106 108 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 PPP2R5CQ13362 524 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 ARHGEF19Q8IW93 802 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 ZFPM1Q8IX07 1006 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 B4GALNT2Q8NHY0 566 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 STMN2Q93045 179 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 HAPLN3Q96S86 360 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 RBM15Q96T37 977 aaKnown RBP eCLIP11.24□□□□□ -0.61
CAPN3-205ENST00000357568 EPAS1Q99814 870 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 TMEM39BQ9GZU3 492 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 PIDD1Q9HB75 910 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 PSMC3IPQ9P2W1 217 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-205ENST00000357568 TMCO1Q9UM00 188 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 PCDHA1Q9Y5I3 950 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 COMMD3-BMI1R4GMX3 469 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 DDTLA6NHG4 134 aaPredicted RBP11.24□□□□□ -0.61
CAPN3-205ENST00000357568 USP17L15C9J2P7 530 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 USP17L13C9JLJ4 530 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 USP17L11C9JVI0 530 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 USP17L18D6R9N7 530 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 USP17L22D6RA61 530 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 USP17L17D6RBQ6 530 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 USP17L19D6RCP7 530 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 USP17L20D6RJB6 530 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 MSH4O15457 936 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 RRM1P23921 792 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 CYP2J2P51589 502 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 CLCN2P51788 898 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 CDK18Q07002 472 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 USP17L24Q0WX57 530 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 EFHC2Q5JST6 749 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 SYDE2Q5VT97 1194 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 RNF220Q5VTB9 566 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 FOXB2Q5VYV0 432 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 USP17L6PQ6QN14 398 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 MAEAQ7L5Y9 396 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 ADGRG6Q86SQ4 1221 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 UCMAQ8WVF2 138 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 MKL1Q969V6 931 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 SKA1Q96BD8 255 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 DDX27Q96GQ7 796 aaKnown RBP11.24□□□□□ -0.61
CAPN3-205ENST00000357568 CCDC17Q96LX7 622 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 MIS12Q9H081 205 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 TBK1Q9UHD2 729 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 SSX2IPQ9Y2D8 614 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 EMSYQ7Z589 1322 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 SSC5DA1L4H1 1573 aa11.24□□□□□ -0.61
CAPN3-205ENST00000357568 H0Y3Z8 333 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 DNALI1O14645 258 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-205ENST00000357568 MAP3K13O43283 966 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 SGPL1O95470 568 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 SNX1Q13596 522 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 MORF4L2Q15014 288 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 TBC1D25Q3MII6 688 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 LRRC23Q53EV4 343 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-205ENST00000357568 ACSBG2Q5FVE4 666 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 TTBK2Q6IQ55 1244 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 PPP1R2P3Q6NXS1 205 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 CHSY1Q86X52 802 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 KATNAL2Q8IYT4 538 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 NRG4Q8WWG1 115 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 LZICQ8WZA0 190 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 NACC1Q96RE7 527 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 CSRNP1Q96S65 589 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 CENPKQ9BS16 269 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 TRIM55Q9BYV6 548 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 OSBPL8Q9BZF1 889 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 ZWILCHQ9H900 591 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 GPAMQ9HCL2 828 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 SLCO1B3Q9NPD5 702 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 GINM1Q9NU53 330 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 GSTTP1A0A1W2PQM5 241 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 CAPN9O14815 690 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 ALOX15BO15296 676 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 CA4P22748 312 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 MAPK4P31152 587 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 CDK16Q00536 496 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 NBPF12Q5TAG4 269 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-205ENST00000357568 ENOSF1Q7L5Y1 443 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 ZNF677Q86XU0 584 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 DHX38Q92620 1227 aaKnown RBP11.23□□□□□ -0.61
CAPN3-205ENST00000357568 PAIP2Q9BPZ3 127 aaKnown RBP11.23□□□□□ -0.61
CAPN3-205ENST00000357568 ZNF341Q9BYN7 854 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 ASCC2Q9H1I8 757 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-205ENST00000357568 PRDM16Q9HAZ2 1276 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 NDUFA13Q9P0J0 144 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 GRID1Q9ULK0 1009 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 SHOC2Q9UQ13 582 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 COQ4Q9Y3A0 265 aa11.23□□□□□ -0.61
CAPN3-205ENST00000357568 GYG2O15488 501 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 CREB3O43889 395 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 CYP11B1P15538 503 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 RPA3P35244 121 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-205ENST00000357568 COG2Q14746 738 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 SLC1A5Q15758 541 aa11.22□□□□□ -0.61
CAPN3-205ENST00000357568 ZC2HC1CQ53FD0 456 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-205ENST00000357568 NET1Q7Z628 596 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-205ENST00000357568 MTDHQ86UE4 582 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms