RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 MTCH2Q9Y6C9 303 aa17.13■□□□□ 0.33
FDPS-201ENST00000356657 LGALS16A8MUM7 142 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 I3L4J1 428 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 PES1O00541 588 aaKnown RBP17.12■□□□□ 0.33
FDPS-201ENST00000356657 GABRDO14764 452 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 WARSP23381 471 aaKnown RBP17.12■□□□□ 0.33
FDPS-201ENST00000356657 IGFBP6P24592 240 aaPredicted RBP17.12■□□□□ 0.33
FDPS-201ENST00000356657 SOWAHAQ2M3V2 549 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 PLPP4Q5VZY2 271 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 ENOSF1Q7L5Y1 443 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 TAS1R1Q7RTX1 841 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 EHBP1Q8NDI1 1231 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 TAB2Q9NYJ8 693 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 NXF1Q9UBU9 619 aaKnown RBP17.12■□□□□ 0.33
FDPS-201ENST00000356657 TBC1D4O60343 1298 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 TPM3P06753 285 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 SRGAP2BP0DMP2 458 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 ASPAP45381 313 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 ADGRE1Q14246 886 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 CCDC85BQ15834 202 aaPredicted RBP17.12■□□□□ 0.33
FDPS-201ENST00000356657 CTXN3Q4LDR2 81 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 WSCD1Q658N2 575 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 TRIM65Q6PJ69 517 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 RTL10Q7L3V2 364 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 UNC93AQ86WB7 457 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 TMEM130Q8N3G9 435 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 LMO3Q8TAP4 145 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 SEMA4DQ92854 862 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 ACBD6Q9BR61 282 aa17.12■□□□□ 0.33
FDPS-201ENST00000356657 EYSQ5T1H1 3165 aa17.11■□□□□ 0.33
FDPS-201ENST00000356657 MTCL1Q9Y4B5 1905 aaKnown RBP17.11■□□□□ 0.33
FDPS-201ENST00000356657 C2CD2LO14523 706 aa17.11■□□□□ 0.33
FDPS-201ENST00000356657 ATP1A3P13637 1013 aa17.11■□□□□ 0.33
FDPS-201ENST00000356657 CA8P35219 290 aa17.11■□□□□ 0.33
FDPS-201ENST00000356657 IRS1P35568 1242 aa17.11■□□□□ 0.33
FDPS-201ENST00000356657 TSPY1Q01534 308 aa17.11■□□□□ 0.33
FDPS-201ENST00000356657 INCA1Q0VD86 236 aa17.11■□□□□ 0.33
FDPS-201ENST00000356657 MAPRE1Q15691 268 aaKnown RBP17.11■□□□□ 0.33
FDPS-201ENST00000356657 TPGS2Q68CL5 300 aa17.11■□□□□ 0.33
FDPS-201ENST00000356657 APTXQ7Z2E3 356 aaKnown RBP17.11■□□□□ 0.33
FDPS-201ENST00000356657 HDAC7Q8WUI4 952 aa17.11■□□□□ 0.33
FDPS-201ENST00000356657 ERGIC2Q96RQ1 377 aa17.11■□□□□ 0.33
FDPS-201ENST00000356657 INTS2Q9H0H0 1204 aaKnown RBP17.11■□□□□ 0.33
FDPS-201ENST00000356657 VPS16Q9H269 839 aa17.11■□□□□ 0.33
FDPS-201ENST00000356657 SNX25Q9H3E2 840 aa17.11■□□□□ 0.33
FDPS-201ENST00000356657 FBXL5Q9UKA1 691 aa17.11■□□□□ 0.33
FDPS-201ENST00000356657 HIDE1A8MVS5 230 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 TEX28O15482 410 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 SERPINC1P01008 464 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 CNPP09543 421 aaKnown RBP17.1■□□□□ 0.33
FDPS-201ENST00000356657 CUL2Q13617 745 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 RAB33AQ14088 237 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 DUSP6Q16828 381 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 PRSS55Q6UWB4 352 aaPredicted RBP17.1■□□□□ 0.33
FDPS-201ENST00000356657 DCP1BQ8IZD4 617 aaKnown RBP17.1■□□□□ 0.33
FDPS-201ENST00000356657 C2orf15Q8WU43 125 aaKnown RBP17.1■□□□□ 0.33
FDPS-201ENST00000356657 KBTBD7Q8WVZ9 684 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 TNIP3Q96KP6 325 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 B3GALT6Q96L58 329 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 KLHL5Q96PQ7 755 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 CLSTN3Q9BQT9 956 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 PI4K2AQ9BTU6 479 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 TLE6Q9H808 572 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 APOBEC3GQ9HC16 384 aaKnown RBP17.1■□□□□ 0.33
FDPS-201ENST00000356657 PLCB1Q9NQ66 1216 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 DDX43Q9NXZ2 648 aaKnown RBP17.1■□□□□ 0.33
FDPS-201ENST00000356657 HSFX1Q9UBD0 423 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 APEX2Q9UBZ4 518 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 CDH9Q9ULB4 789 aa17.1■□□□□ 0.33
FDPS-201ENST00000356657 A0A1B0GTH6 734 aa17.09■□□□□ 0.33
FDPS-201ENST00000356657 KLRC2P26717 231 aa17.09■□□□□ 0.33
FDPS-201ENST00000356657 PON1P27169 355 aa17.09■□□□□ 0.33
FDPS-201ENST00000356657 GNL1P36915 607 aaPredicted RBP17.09■□□□□ 0.33
FDPS-201ENST00000356657 NFE2Q16621 373 aaPredicted RBP17.09■□□□□ 0.33
FDPS-201ENST00000356657 SCARA3Q6AZY7 606 aa17.09■□□□□ 0.33
FDPS-201ENST00000356657 ZNF461Q8TAF7 563 aa17.09■□□□□ 0.33
FDPS-201ENST00000356657 BARX2Q9UMQ3 279 aaPredicted RBP17.09■□□□□ 0.33
FDPS-201ENST00000356657 TIMM13Q9Y5L4 95 aaPredicted RBP17.09■□□□□ 0.33
FDPS-201ENST00000356657 CDY1Q9Y6F8 540 aa17.09■□□□□ 0.33
FDPS-201ENST00000356657 A0A1W2PQC6 194 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 GLUD1P00367 558 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 OR1D2P34982 312 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 UBXN1Q04323 297 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 GPR17Q13304 367 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 SKIV2LQ15477 1246 aaKnown RBP17.08■□□□□ 0.32
FDPS-201ENST00000356657 SPOPLQ6IQ16 392 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 PPM1KQ8N3J5 372 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 EFHBQ8N7U6 833 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 OR6B3Q8NGW1 331 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 AUTS2Q8WXX7 1259 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 CRACR2AQ9BSW2 395 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 PLEKHA4Q9H4M7 779 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 SMYD3Q9H7B4 428 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 RTN4Q9NQC3 1192 aaKnown RBP17.08■□□□□ 0.32
FDPS-201ENST00000356657 POLIQ9UNA4 740 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 BRWD1Q9NSI6 2320 aa17.08■□□□□ 0.32
FDPS-201ENST00000356657 CBFA2T2O43439 604 aa17.07■□□□□ 0.32
FDPS-201ENST00000356657 CPB1P15086 417 aa17.07■□□□□ 0.32
FDPS-201ENST00000356657 MFAP3P55082 362 aa17.07■□□□□ 0.32
FDPS-201ENST00000356657 FANCCQ00597 558 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms