RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 NUP107P57740 925 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 BTKQ06187 659 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 MAPK6Q16659 721 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 CLEC4GQ6UXB4 293 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 RBM15BQ8NDT2 890 aaKnown RBP16.55■□□□□ 0.24
RTN3-205ENST00000356000 CLPTM1LQ96KA5 538 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 TRIM55Q9BYV6 548 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 TRABDQ9H4I3 376 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 TRNAU1APQ9NX07 287 aaKnown RBP16.55■□□□□ 0.24
RTN3-205ENST00000356000 KAT6BQ8WYB5 2073 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 EIF2S1P05198 315 aaKnown RBP16.55■□□□□ 0.24
RTN3-205ENST00000356000 PMLP29590 882 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 HOXA7P31268 230 aaPredicted RBP16.55■□□□□ 0.24
RTN3-205ENST00000356000 MARSP56192 900 aaKnown RBP16.55■□□□□ 0.24
RTN3-205ENST00000356000 NDUFA5Q16718 116 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 SPOPLQ6IQ16 392 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 LRP10Q7Z4F1 713 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 ARMC7Q9H6L4 198 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 CLK4Q9HAZ1 481 aaKnown RBP16.55■□□□□ 0.24
RTN3-205ENST00000356000 PADI4Q9UM07 663 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 BCORQ6W2J9 1755 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 TOGARAM1Q9Y4F4 1720 aa16.55■□□□□ 0.24
RTN3-205ENST00000356000 H3BRJ5 948 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 CASQ2O14958 399 aaPredicted RBP16.54■□□□□ 0.24
RTN3-205ENST00000356000 MYCLP1P12525 358 aaPredicted RBP16.54■□□□□ 0.24
RTN3-205ENST00000356000 ITIH2P19823 946 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 MCAMP43121 646 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 RASA2Q15283 850 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 SEPT7Q16181 437 aaKnown RBP16.54■□□□□ 0.24
RTN3-205ENST00000356000 DNAL1Q4LDG9 190 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 DCLRE1AQ6PJP8 1040 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 ZNF713Q8N859 430 aaPredicted RBP16.54■□□□□ 0.24
RTN3-205ENST00000356000 FBXO27Q8NI29 283 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 AK8Q96MA6 479 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 THTPAQ9BU02 230 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 MAK16Q9BXY0 300 aaKnown RBP16.54■□□□□ 0.24
RTN3-205ENST00000356000 KCNK13Q9HB14 408 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 GIN1Q9NXP7 522 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.54■□□□□ 0.246e-7■■■■□ 22.6
RTN3-205ENST00000356000 PCDHA4Q9UN74 947 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 MYH11P35749 1972 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 TCRBV5S4A2TA0A5A2 114 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 DYTNA2CJ06 578 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 KLRF2D3W0D1 207 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 TMEM253P0C7T8 217 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 CPA2P48052 419 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 OVGP1Q12889 678 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 SEPT6Q14141 434 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 ACAP1Q15027 740 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 CENPSQ8N2Z9 138 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 SLC25A41Q8N5S1 370 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 SGF29Q96ES7 293 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 ZNF287Q9HBT7 754 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 MAD1L1Q9Y6D9 718 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 AKAP11Q9UKA4 1901 aa16.54■□□□□ 0.24
RTN3-205ENST00000356000 UBR3Q6ZT12 1888 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 UCHL3P15374 230 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 PDE6AP16499 860 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 MYBPC1Q00872 1141 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 ARSHQ5FYA8 562 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 TTC7BQ86TV6 843 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 C11orf74Q86VG3 221 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 PYDC1Q8WXC3 89 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 BORCS5Q969J3 196 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 CEP63Q96MT8 703 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 VTA1Q9NP79 307 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 SENP1Q9P0U3 644 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 FRMD4BQ9Y2L6 1034 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 TNKSO95271 1327 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 CNTNAP5Q8WYK1 1306 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 K7EPI3 171 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 TNFRSF10AO00220 468 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 TRAF5O00463 557 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 LAD1O00515 517 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 FCHO1O14526 889 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 TIMM44O43615 452 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 DNAJA2O60884 412 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 ACTN1P12814 892 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 CA4P22748 312 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 HOXD13P35453 343 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 PIK3CAP42336 1068 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 DLGAP5Q15398 846 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 PRUNE1Q86TP1 453 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 BPHLQ86WA6 291 aaPredicted RBP16.53■□□□□ 0.24
RTN3-205ENST00000356000 TMEM120AQ9BXJ8 343 aa16.53■□□□□ 0.24
RTN3-205ENST00000356000 TYROBPO43914 113 aa16.52■□□□□ 0.24
RTN3-205ENST00000356000 ZBED4O75132 1171 aa16.52■□□□□ 0.24
RTN3-205ENST00000356000 RBP3P10745 1247 aa16.52■□□□□ 0.24
RTN3-205ENST00000356000 EEF2P13639 858 aaKnown RBP16.52■□□□□ 0.24
RTN3-205ENST00000356000 PON1P27169 355 aa16.52■□□□□ 0.24
RTN3-205ENST00000356000 KCNJ1P48048 391 aa16.52■□□□□ 0.24
RTN3-205ENST00000356000 IRX4P78413 519 aa16.52■□□□□ 0.24
RTN3-205ENST00000356000 DCAF6Q58WW2 860 aa16.52■□□□□ 0.24
RTN3-205ENST00000356000 RWDD4Q6NW29 188 aaKnown RBP16.52■□□□□ 0.24
RTN3-205ENST00000356000 VASH1Q7L8A9 365 aaPredicted RBP16.52■□□□□ 0.24
RTN3-205ENST00000356000 C12orf50Q8NA57 414 aaPredicted RBP16.52■□□□□ 0.24
RTN3-205ENST00000356000 CHPT1Q8WUD6 406 aa16.52■□□□□ 0.24
RTN3-205ENST00000356000 SLCO2A1Q92959 643 aa16.52■□□□□ 0.24
RTN3-205ENST00000356000 ZNF496Q96IT1 587 aaPredicted RBP16.52■□□□□ 0.24
RTN3-205ENST00000356000 GCNAQ96QF7 691 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms