RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 RFC5P40937 340 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 WDR4P57081 412 aaKnown RBP13.68□□□□□ -0.22
RNF220-202ENST00000355387 ACTR2P61160 394 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 RNASEH2BQ5TBB1 312 aaKnown RBP13.68□□□□□ -0.22
RNF220-202ENST00000355387 SWSAP1Q6NVH7 229 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 TMEM270Q6UE05 265 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 CCDC60Q8IWA6 550 aaPredicted RBP13.68□□□□□ -0.22
RNF220-202ENST00000355387 LRMDAQ9H2I8 198 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 BATF3Q9NR55 127 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 GSTTP1A0A1W2PQM5 241 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 HNRNPCL1O60812 293 aaKnown RBP13.68□□□□□ -0.22
RNF220-202ENST00000355387 DCTN3O75935 186 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 FOXN2P32314 431 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 KCNJ2P63252 427 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 MOGSQ13724 837 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 CRYMQ14894 314 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 ZPBP2Q6X784 338 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 CENPUQ71F23 418 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 PNMA8AQ86V59 439 aaPredicted RBP13.68□□□□□ -0.22
RNF220-202ENST00000355387 ECHDC2Q86YB7 292 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 SH3TC2Q8TF17 1288 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 C9orf72Q96LT7 481 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 C15orf41Q9Y2V0 281 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 PTPRJQ12913 1337 aa13.68□□□□□ -0.22
RNF220-202ENST00000355387 hCG_1818297A0A087WSY0 165 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 MSH2P43246 934 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 LACTBP83111 547 aaPredicted RBP13.67□□□□□ -0.22
RNF220-202ENST00000355387 TBC1D10BQ4KMP7 808 aaPredicted RBP13.67□□□□□ -0.22
RNF220-202ENST00000355387 TFDP3Q5H9I0 405 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 EFHC2Q5JST6 749 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 WDR49Q8IV35 697 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 AGGF1Q8N302 714 aaeCLIP13.67□□□□□ -0.222e-6■■□□□ 11.5
RNF220-202ENST00000355387 TTC13Q8NBP0 860 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 GDAP1Q8TB36 358 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 SLC35B2Q8TB61 432 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 FAXDC2Q96IV6 333 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 RSRC1Q96IZ7 334 aaKnown RBP13.67□□□□□ -0.22
RNF220-202ENST00000355387 SAYSD1Q9NPB0 183 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 ASS1P00966 412 aaKnown RBP13.67□□□□□ -0.22
RNF220-202ENST00000355387 KRT1P04264 644 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 CD58P19256 250 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 MGAT5Q09328 741 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 SETDB1Q15047 1291 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 TMED2Q15363 201 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 SURF1Q15526 300 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 TAZQ16635 292 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 BRSK2Q8IWQ3 736 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 NIM1KQ8IY84 436 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 ZNF606Q8WXB4 792 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 RMDN2Q96LZ7 410 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 SMC6Q96SB8 1091 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 IMPG2Q9BZV3 1241 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 TRABDQ9H4I3 376 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 AS3MTQ9HBK9 375 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 MYOZ2Q9NPC6 264 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 PSMC3IPQ9P2W1 217 aaPredicted RBP13.67□□□□□ -0.22
RNF220-202ENST00000355387 DNPEPQ9ULA0 475 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
RNF220-202ENST00000355387 FARP1Q9Y4F1 1045 aaPredicted RBP13.67□□□□□ -0.22
RNF220-202ENST00000355387 IGKV6D-21A0A0A0MT36 114 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 E7ENQ6 273 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 EDF1O60869 148 aaKnown RBP13.67□□□□□ -0.22
RNF220-202ENST00000355387 ZWINTO95229 277 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 OATP04181 439 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 EIF4BP23588 611 aaKnown RBP13.67□□□□□ -0.22
RNF220-202ENST00000355387 ARSEP51690 589 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 ZNF280AP59817 542 aaPredicted RBP13.67□□□□□ -0.22
RNF220-202ENST00000355387 FNIP1Q8TF40 1166 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 MIEF2Q96C03 454 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 HAPLN2Q9GZV7 340 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 STRIP2Q9ULQ0 834 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 NUB1Q9Y5A7 615 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 ZNF541Q9H0D2 1346 aa13.67□□□□□ -0.22
RNF220-202ENST00000355387 TRAFD1O14545 582 aaPredicted RBP13.66□□□□□ -0.22
RNF220-202ENST00000355387 TYROBPO43914 113 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 GLRA2P23416 452 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 ALDH3A1P30838 453 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 SOX10P56693 466 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 WNT7BP56706 349 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 ZNF252P-AS1Q0IIN9 211 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 ANKLE1Q8NAG6 615 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 TMEM35BQ8NCS4 154 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 DEPTORQ8TB45 409 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 N4BP2L2Q92802 583 aaPredicted RBP13.66□□□□□ -0.22
RNF220-202ENST00000355387 DHRS4Q9BTZ2 278 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 MSTO1Q9BUK6 570 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 ZNF148Q9UQR1 794 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 E7ESA3 106 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 K7ERI5 159 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 CALCAP01258 141 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 KRT16P08779 473 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 PECAM1P16284 738 aaPredicted RBP13.66□□□□□ -0.22
RNF220-202ENST00000355387 PHBP35232 272 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 CDKN2BP42772 138 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 VPS41P49754 854 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 TGFB2P61812 414 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 ATP11AP98196 1134 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 MTMR2Q13614 643 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 NCOA4Q13772 614 aa13.66□□□□□ -0.22
RNF220-202ENST00000355387 SPOPLQ6IQ16 392 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms