RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 LMBRD2Q68DH5 695 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 SETD3Q86TU7 594 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 UNC5CLQ8IV45 518 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 CAMKK2Q96RR4 588 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 THUMPD3Q9BV44 507 aaKnown RBP6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 CDY2AQ9Y6F7 541 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 CDY1Q9Y6F8 540 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 VWA5AO00534 786 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 TRIM32Q13049 653 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 CLEC16AQ2KHT3 1053 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 TDRD10Q5VZ19 366 aaKnown RBP6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 RNF112Q9ULX5 631 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 VPS9D1Q9Y2B5 631 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 PCDHA10Q9Y5I2 948 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 POLRMTO00411 1230 aaKnown RBP6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 PTK7Q13308 1070 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 DCAF6Q58WW2 860 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 PRPF39Q86UA1 669 aaKnown RBP6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 MARCH10Q8NA82 808 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 FAM200BP0CF97 657 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 RTL3Q8N8U3 475 aaKnown RBP6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 USP13Q92995 863 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 STRNO43815 780 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 POLBP06746 335 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 CAMK2GQ13555 558 aaPredicted RBP6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 SV2CQ496J9 727 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 SLC25A24Q6NUK1 477 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 SLC30A5Q8TAD4 765 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 CPA5Q8WXQ8 436 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 TIPINQ9BVW5 301 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 RNPEPQ9H4A4 650 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 ADAM30Q9UKF2 790 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 PADI4Q9UM07 663 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 AGPAT1Q99943 283 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 NEU2Q9Y3R4 380 aa6.03□□□□□ -1.44
SRGAP1-201ENST00000355086 FAM47DPA6NHR8 397 aa6.02□□□□□ -1.44
SRGAP1-201ENST00000355086 TRIM49P0CI25 452 aa6.02□□□□□ -1.44
SRGAP1-201ENST00000355086 TRIM49CP0CI26 452 aa6.02□□□□□ -1.44
SRGAP1-201ENST00000355086 PTPN7P35236 360 aa6.02□□□□□ -1.44
SRGAP1-201ENST00000355086 TTC39BQ5VTQ0 682 aaPredicted RBP6.02□□□□□ -1.44
SRGAP1-201ENST00000355086 CENPLQ8N0S6 344 aaPredicted RBP6.02□□□□□ -1.44
SRGAP1-201ENST00000355086 WDR36Q8NI36 951 aaKnown RBP6.02□□□□□ -1.44
SRGAP1-201ENST00000355086 SLC7A14Q8TBB6 771 aa6.02□□□□□ -1.44
SRGAP1-201ENST00000355086 GRAP2O75791 330 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 NFIL3Q16649 462 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 FUT11Q495W5 492 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 SPATA18Q8TC71 538 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 FAM196BA6NMK8 535 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 C2CD2LO14523 706 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 CSNK2BP67870 215 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 CACHD1Q5VU97 1274 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 CCDC3Q9BQI4 270 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 EIF3LQ9Y262 564 aaKnown RBP6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 PEX1O43933 1283 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 RNASEH1O60930 286 aaKnown RBP6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 VSNL1P62760 191 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 COG2Q14746 738 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 UXS1Q8NBZ7 420 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 HDHD2Q9H0R4 259 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 SPATA2Q9UM82 520 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 RAPGEF6Q8TEU7 1601 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 P4HA2O15460 535 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 NFICP08651 508 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 FDX1P10109 184 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 C10orf120Q5SQS8 335 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 BHMTQ93088 406 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 MS4A14Q96JA4 679 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 ITGA4P13612 1032 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 PBLDP30039 288 aaPredicted RBP6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 IRAK1BP1Q5VVH5 260 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 TMCC3Q9ULS5 477 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 PDZK1P1A8MUH7 402 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 TMEM132BQ14DG7 1078 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 TRIP10Q15642 601 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 SLC44A4Q53GD3 710 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 PHACTR4Q8IZ21 702 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 SLITRK1Q96PX8 696 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 RBM15Q96T37 977 aaKnown RBP eCLIP6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 NMRK2Q9NPI5 230 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 TUBGCP4Q9UGJ1 667 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 KCNB1Q14721 858 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 CYP4Z1Q86W10 505 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 MOSPD2Q8NHP6 518 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 ADI1Q9BV57 179 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 CHMP2BQ9UQN3 213 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 PSMD7P51665 324 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 TRIM25Q14258 630 aaKnown RBP6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 TLK2Q86UE8 772 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 TMEM47Q9BQJ4 181 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 GALNT8Q9NY28 637 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 ZNF335Q9H4Z2 1342 aaPredicted RBP6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 F5H6K3 240 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 KLRC3Q07444 240 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 RNPC3Q96LT9 517 aaKnown RBP6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 STRBPQ96SI9 672 aaKnown RBP6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 PIH1D3Q9NQM4 214 aaKnown RBP6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 DBR1Q9UK59 544 aaKnown RBP6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 IQCA1LA6NCM1 817 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 COX10Q12887 443 aa6.02□□□□□ -1.45
SRGAP1-201ENST00000355086 BYSLQ13895 437 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms