RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 CTNNA1P35221 906 aaKnown RBP10.73□□□□□ -0.69
SYNE1-203ENST00000354674 SERPINB4P48594 390 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 LIG4P49917 911 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 BPIFB4P59827 614 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 MAPK6Q16659 721 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 RASIP1Q5U651 963 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 DPY19L2P1Q6NXN4 242 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 ISLR2Q6UXK2 745 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 RUFY4Q6ZNE9 571 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 TSHZ1Q6ZSZ6 1077 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 INTS8Q75QN2 995 aaKnown RBP10.73□□□□□ -0.69
SYNE1-203ENST00000354674 IQCKQ8N0W5 287 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 CCDC197Q8NCU1 140 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 IQCDQ96DY2 449 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 MRPL4Q9BYD3 311 aaKnown RBP10.73□□□□□ -0.69
SYNE1-203ENST00000354674 ECT2Q9H8V3 914 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 GTPBP10A4D1E9 387 aaKnown RBP10.73□□□□□ -0.69
SYNE1-203ENST00000354674 TMEM110-MUSTN1A8MSY1 372 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 PMM2O15305 246 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 FAM189A1O60320 539 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 AFPP02771 609 aaKnown RBP10.73□□□□□ -0.69
SYNE1-203ENST00000354674 VTNP04004 478 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 SPATA31D3P0C874 917 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 ALDH3A1P30838 453 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 PHKA2P46019 1235 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 BFSP1Q12934 665 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 KCNA10Q16322 511 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 C1orf220Q5T0J3 134 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 SPATA31D4Q6ZUB0 917 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 NLRP4Q96MN2 994 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 NDNQ99608 321 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 TARS2Q9BW92 718 aaKnown RBP10.73□□□□□ -0.69
SYNE1-203ENST00000354674 KIAA1586Q9HCI6 787 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 METTL5Q9NRN9 209 aaKnown RBP10.73□□□□□ -0.69
SYNE1-203ENST00000354674 GTF2IRD1Q9UHL9 959 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 AKT3Q9Y243 479 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 KAT6AQ92794 2004 aa10.73□□□□□ -0.69
SYNE1-203ENST00000354674 ATXN2Q99700 1313 aaKnown RBP10.72□□□□□ -0.69
SYNE1-203ENST00000354674 A0A1W2PQJ5 194 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 EXTL3O43909 919 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 ASGR1P07306 291 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 ADRB2P07550 413 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 ZCCHC18P0CG32 403 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 USP46P62068 366 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 LRRC14Q15048 493 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 SNRNP35Q16560 246 aaKnown RBP10.72□□□□□ -0.69
SYNE1-203ENST00000354674 CXCL17Q6UXB2 119 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 GPD1LQ8N335 351 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 PCSK9Q8NBP7 692 aaKnown RBP10.72□□□□□ -0.69
SYNE1-203ENST00000354674 PLEKHO2Q8TD55 490 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 POMGNT1Q8WZA1 660 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 NAA15Q9BXJ9 866 aaKnown RBP10.72□□□□□ -0.69
SYNE1-203ENST00000354674 AGPAT5Q9NUQ2 364 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 PRMT7Q9NVM4 692 aaPredicted RBP10.72□□□□□ -0.69
SYNE1-203ENST00000354674 CAPN11Q9UMQ6 739 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 PTPN22Q9Y2R2 807 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 TRIM17Q9Y577 477 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 A0A087WZ62 844 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 TREHO43280 583 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 TOM1L1O75674 476 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 FECHP22830 423 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 CLDN10P78369 228 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 MCL1Q07820 350 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 DHX9Q08211 1270 aaKnown RBP10.72□□□□□ -0.69
SYNE1-203ENST00000354674 ADCY1Q08828 1119 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 CCDC15Q0P6D6 951 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 KRT71Q3SY84 523 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 CRELD2Q6UXH1 353 aaPredicted RBP10.72□□□□□ -0.69
SYNE1-203ENST00000354674 NME8Q8N427 588 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 CCDC155Q8N6L0 562 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 C7orf31Q8N865 590 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 TMC2Q8TDI7 906 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 FDXACB1Q9BRP7 624 aaPredicted RBP10.72□□□□□ -0.69
SYNE1-203ENST00000354674 TSEN34Q9BSV6 310 aaKnown RBP10.72□□□□□ -0.69
SYNE1-203ENST00000354674 BEGAINQ9BUH8 593 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 HMX1Q9NP08 348 aaPredicted RBP10.72□□□□□ -0.69
SYNE1-203ENST00000354674 TSKSQ9UJT2 592 aa10.72□□□□□ -0.69
SYNE1-203ENST00000354674 KRT86O43790 486 aa10.71□□□□□ -0.69
SYNE1-203ENST00000354674 CYP2C9P11712 490 aa10.71□□□□□ -0.69
SYNE1-203ENST00000354674 NQO1P15559 274 aaKnown RBP10.71□□□□□ -0.69
SYNE1-203ENST00000354674 LMBRD2Q68DH5 695 aaPredicted RBP10.71□□□□□ -0.69
SYNE1-203ENST00000354674 CBWD2Q8IUF1 395 aa10.71□□□□□ -0.69
SYNE1-203ENST00000354674 ZBTB45Q96K62 511 aaPredicted RBP10.71□□□□□ -0.69
SYNE1-203ENST00000354674 ADAM22Q9P0K1 906 aa10.71□□□□□ -0.69
SYNE1-203ENST00000354674 TNFSF13BQ9Y275 285 aa10.71□□□□□ -0.69
SYNE1-203ENST00000354674 USP20Q9Y2K6 914 aa10.71□□□□□ -0.69
SYNE1-203ENST00000354674 CNTNAP2Q9UHC6 1331 aa10.71□□□□□ -0.69
SYNE1-203ENST00000354674 DNAJC8O75937 253 aaPredicted RBP10.71□□□□□ -0.69
SYNE1-203ENST00000354674 CABYRO75952 493 aa10.71□□□□□ -0.69
SYNE1-203ENST00000354674 LDHAP00338 332 aaKnown RBP10.71□□□□□ -0.69
SYNE1-203ENST00000354674 EIF4BP23588 611 aaKnown RBP10.71□□□□□ -0.69
SYNE1-203ENST00000354674 VAMP7P51809 220 aa10.71□□□□□ -0.69
SYNE1-203ENST00000354674 ZNF200P98182 395 aaPredicted RBP10.71□□□□□ -0.69
SYNE1-203ENST00000354674 CYP24A1Q07973 514 aa10.71□□□□□ -0.69
SYNE1-203ENST00000354674 PCBP1Q15365 356 aaKnown RBP eCLIP10.71□□□□□ -0.69
SYNE1-203ENST00000354674 CEP128Q6ZU80 1094 aa10.71□□□□□ -0.69
SYNE1-203ENST00000354674 CASKIN2Q8WXE0 1202 aa10.71□□□□□ -0.69
SYNE1-203ENST00000354674 CCDC51Q96ER9 411 aa10.71□□□□□ -0.69
SYNE1-203ENST00000354674 AGO2Q9UKV8 859 aaKnown RBP10.71□□□□□ -0.69
SYNE1-203ENST00000354674 GFPT2O94808 682 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms