RNA–Protein interactions for RNA: ENST00000354636.7

HMGA2-201, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-201ENST00000354636 DRAP1Q14919 205 aaPredicted RBP25.92■■□□□ 1.74
HMGA2-201ENST00000354636 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.92■■□□□ 1.74
HMGA2-201ENST00000354636 CEP57Q86XR8 500 aa25.92■■□□□ 1.74
HMGA2-201ENST00000354636 SHC3Q92529 594 aa25.92■■□□□ 1.74
HMGA2-201ENST00000354636 B3GALT6Q96L58 329 aa25.92■■□□□ 1.74
HMGA2-201ENST00000354636 TTPALQ9BTX7 342 aa25.92■■□□□ 1.74
HMGA2-201ENST00000354636 C11orf84Q9BUA3 381 aaPredicted RBP25.92■■□□□ 1.74
HMGA2-201ENST00000354636 HERC2P3Q9BVR0 1158 aa25.92■■□□□ 1.74
HMGA2-201ENST00000354636 TRIOBPQ9H2D6 2365 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 A0A1W2PQJ5 194 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 CD58P19256 250 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 YWHAEP62258 255 aaKnown RBP25.91■■□□□ 1.74
HMGA2-201ENST00000354636 YWHAHQ04917 246 aaPredicted RBP25.91■■□□□ 1.74
HMGA2-201ENST00000354636 TBX2Q13207 712 aaPredicted RBP25.91■■□□□ 1.74
HMGA2-201ENST00000354636 MRPL58Q14197 206 aaKnown RBP25.91■■□□□ 1.74
HMGA2-201ENST00000354636 RTP2Q5QGT7 225 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 CACNA2D4Q7Z3S7 1137 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 OSTM1Q86WC4 334 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 METTL23Q86XA0 190 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 VPS52Q8N1B4 723 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 TTC39CQ8N584 583 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 FBXO22Q8NEZ5 403 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 SPPL3Q8TCT6 385 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 ARNTL2Q8WYA1 636 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 BAP1Q92560 729 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 ALG13Q9NP73 1137 aaKnown RBP25.91■■□□□ 1.74
HMGA2-201ENST00000354636 PUF60Q9UHX1 559 aaKnown RBP25.91■■□□□ 1.74
HMGA2-201ENST00000354636 BARX2Q9UMQ3 279 aaPredicted RBP25.91■■□□□ 1.74
HMGA2-201ENST00000354636 CAPN11Q9UMQ6 739 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 CNTN6Q9UQ52 1028 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 NME7Q9Y5B8 376 aa25.91■■□□□ 1.74
HMGA2-201ENST00000354636 RNF225M0QZC1 329 aaPredicted RBP25.9■■□□□ 1.74
HMGA2-201ENST00000354636 OAZ2O95190 189 aa25.9■■□□□ 1.74
HMGA2-201ENST00000354636 LHX1P48742 406 aa25.9■■□□□ 1.74
HMGA2-201ENST00000354636 JAM2P57087 298 aa25.9■■□□□ 1.74
HMGA2-201ENST00000354636 UBE3AQ05086 875 aa25.9■■□□□ 1.74
HMGA2-201ENST00000354636 TRIM14Q14142 442 aa25.9■■□□□ 1.74
HMGA2-201ENST00000354636 VARS2Q5ST30 1063 aaKnown RBP25.9■■□□□ 1.74
HMGA2-201ENST00000354636 SMYD5Q6GMV2 418 aa25.9■■□□□ 1.74
HMGA2-201ENST00000354636 OVOS1Q6IE37 1185 aa25.9■■□□□ 1.74
HMGA2-201ENST00000354636 OR6B3Q8NGW1 331 aa25.9■■□□□ 1.74
HMGA2-201ENST00000354636 STXBP5LQ9Y2K9 1186 aa25.9■■□□□ 1.74
HMGA2-201ENST00000354636 H3BNC9 293 aa25.89■■□□□ 1.74
HMGA2-201ENST00000354636 FOXN3O00409 490 aaPredicted RBP25.89■■□□□ 1.74
HMGA2-201ENST00000354636 CILPO75339 1184 aa25.89■■□□□ 1.74
HMGA2-201ENST00000354636 GNL1P36915 607 aaPredicted RBP25.89■■□□□ 1.74
HMGA2-201ENST00000354636 DSG1Q02413 1049 aa25.89■■□□□ 1.74
HMGA2-201ENST00000354636 WHAMMQ8TF30 809 aa25.89■■□□□ 1.74
HMGA2-201ENST00000354636 SNX25Q9H3E2 840 aa25.89■■□□□ 1.74
HMGA2-201ENST00000354636 DDX43Q9NXZ2 648 aaKnown RBP25.89■■□□□ 1.74
HMGA2-201ENST00000354636 F8VZ95 297 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 LMO2P25791 158 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 FXR1P51114 621 aaKnown RBP eCLIP25.88■■□□□ 1.73
HMGA2-201ENST00000354636 NDST1P52848 882 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 KIAA0319Q5VV43 1072 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 KIAA1841Q6NSI8 718 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 UNC93AQ86WB7 457 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 CPLX3Q8WVH0 158 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 POF1BQ8WVV4 589 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 PIK3R5Q8WYR1 880 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 SPAG5Q96R06 1193 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 RTP3Q9BQQ7 232 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 ZBP1Q9H171 429 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 HMGXB4Q9UGU5 601 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 MYO6Q9UM54 1294 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 PCDHB4Q9Y5E5 795 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 CSPG5O95196 566 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 DNAJB1P25685 340 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 CASP14P31944 242 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 GLUD2P49448 558 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 GPM6BQ13491 265 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 TMEM270Q6UE05 265 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 ANKS3Q6ZW76 656 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 PPFIBP1Q86W92 1011 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 GPR65Q8IYL9 337 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 FAM71AQ8IYT1 594 aa25.88■■□□□ 1.73
HMGA2-201ENST00000354636 LNX1Q8TBB1 728 aaPredicted RBP25.88■■□□□ 1.73
HMGA2-201ENST00000354636 A8MXQ7 604 aa25.87■■□□□ 1.73
HMGA2-201ENST00000354636 GRM6O15303 877 aa25.87■■□□□ 1.73
HMGA2-201ENST00000354636 HCRTO43612 131 aa25.87■■□□□ 1.73
HMGA2-201ENST00000354636 PNMA6AP0CW24 399 aaPredicted RBP25.87■■□□□ 1.73
HMGA2-201ENST00000354636 CTSAP10619 480 aa25.87■■□□□ 1.73
HMGA2-201ENST00000354636 ZBED6P86452 979 aa25.87■■□□□ 1.73
HMGA2-201ENST00000354636 DRC7Q8IY82 874 aa25.87■■□□□ 1.73
HMGA2-201ENST00000354636 THEM5Q8N1Q8 247 aa25.87■■□□□ 1.73
HMGA2-201ENST00000354636 RIN2Q8WYP3 895 aaPredicted RBP25.87■■□□□ 1.73
HMGA2-201ENST00000354636 TWNKQ96RR1 684 aa25.87■■□□□ 1.73
HMGA2-201ENST00000354636 LUC7L2Q9Y383 392 aaKnown RBP25.87■■□□□ 1.73
HMGA2-201ENST00000354636 TBC1D4O60343 1298 aa25.86■■□□□ 1.73
HMGA2-201ENST00000354636 URODP06132 367 aa25.86■■□□□ 1.73
HMGA2-201ENST00000354636 PDGFRBP09619 1106 aa25.86■■□□□ 1.73
HMGA2-201ENST00000354636 CA8P35219 290 aa25.86■■□□□ 1.73
HMGA2-201ENST00000354636 ZNF132P52740 706 aa25.86■■□□□ 1.73
HMGA2-201ENST00000354636 RAD23BP54727 409 aa25.86■■□□□ 1.73
HMGA2-201ENST00000354636 ZNF394Q53GI3 561 aa25.86■■□□□ 1.73
HMGA2-201ENST00000354636 PDXDC1Q6P996 788 aa25.86■■□□□ 1.73
HMGA2-201ENST00000354636 PRSS55Q6UWB4 352 aaPredicted RBP25.86■■□□□ 1.73
HMGA2-201ENST00000354636 ZNF397Q8NF99 534 aaPredicted RBP25.86■■□□□ 1.73
HMGA2-201ENST00000354636 ACBD6Q9BR61 282 aa25.86■■□□□ 1.73
HMGA2-201ENST00000354636 NT5C1AQ9BXI3 368 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms