RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 PLD1Q13393 1074 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 TMEM132DQ14C87 1099 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 SCARA3Q6AZY7 606 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 BRAPQ7Z569 592 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 DNAJB7Q7Z6W7 309 aaPredicted RBP17.19■□□□□ 0.34
PDGFA-201ENST00000354513 CD302Q8IX05 232 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 FAM3CQ92520 227 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 LPIN3Q9BQK8 851 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 ZCWPW1Q9H0M4 648 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 ZHX3Q9H4I2 956 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 FBXO2Q9UK22 296 aaPredicted RBP17.19■□□□□ 0.34
PDGFA-201ENST00000354513 SMG5Q9UPR3 1016 aaKnown RBP17.19■□□□□ 0.34
PDGFA-201ENST00000354513 CLIC4Q9Y696 253 aa17.19■□□□□ 0.34
PDGFA-201ENST00000354513 MAN2B1O00754 1011 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 ZNF263O14978 683 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 TBCAO75347 108 aaKnown RBP17.18■□□□□ 0.34
PDGFA-201ENST00000354513 PRAMEF12O95522 483 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 BMP15O95972 392 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 KRT18P05783 430 aaKnown RBP17.18■□□□□ 0.34
PDGFA-201ENST00000354513 TGM1P22735 817 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 CCNE1P24864 410 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 MCM2P49736 904 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 EPHB3P54753 998 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 KCNA1Q09470 495 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 CUL4AQ13619 759 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 TXNDC11Q6PKC3 985 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 MAMSTRQ6ZN01 415 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 LRRTM3Q86VH5 581 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 DNAJC19Q96DA6 116 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 HINFPQ9BQA5 517 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 GPR88Q9GZN0 384 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 LMAN1LQ9HAT1 526 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 DLL3Q9NYJ7 618 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 HSFX1Q9UBD0 423 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 C2CD2Q9Y426 696 aa17.18■□□□□ 0.34
PDGFA-201ENST00000354513 CHADO15335 359 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 GABRR2P28476 465 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 HOXC13P31276 330 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 DDIT3P35638 169 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 ALDH1A3P47895 512 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 CYP4F8P98187 520 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 SATB1Q01826 763 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 RESTQ13127 1097 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 SLC39A12Q504Y0 691 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 ADALQ6DHV7 355 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 FAM173BQ6P4H8 233 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 DYMQ7RTS9 669 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 ZNF720Q7Z2F6 126 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 ARID3BQ8IVW6 561 aaPredicted RBP17.17■□□□□ 0.34
PDGFA-201ENST00000354513 ZFYVE19Q96K21 471 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 FAM84AQ96KN4 292 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 FGFBP2Q9BYJ0 223 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 SLITRK6Q9H5Y7 841 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 ASB7Q9H672 318 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 RBM12Q9NTZ6 932 aaKnown RBP17.17■□□□□ 0.34
PDGFA-201ENST00000354513 C2orf42Q9NWW7 574 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 AGO2Q9UKV8 859 aaKnown RBP17.17■□□□□ 0.34
PDGFA-201ENST00000354513 ASB3Q9Y575 518 aa17.17■□□□□ 0.34
PDGFA-201ENST00000354513 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.17■□□□□ 0.34
PDGFA-201ENST00000354513 MYMKA6NI61 221 aa17.16■□□□□ 0.34
PDGFA-201ENST00000354513 SLC38A8A6NNN8 435 aa17.16■□□□□ 0.34
PDGFA-201ENST00000354513 CASP5P51878 434 aa17.16■□□□□ 0.34
PDGFA-201ENST00000354513 MLLT6P55198 1093 aaPredicted RBP17.16■□□□□ 0.34
PDGFA-201ENST00000354513 DMWDQ09019 674 aa17.16■□□□□ 0.34
PDGFA-201ENST00000354513 Q6ZS52 159 aa17.16■□□□□ 0.34
PDGFA-201ENST00000354513 TMEM150AQ86TG1 271 aa17.16■□□□□ 0.34
PDGFA-201ENST00000354513 ATRIPQ8WXE1 791 aa17.16■□□□□ 0.34
PDGFA-201ENST00000354513 CLIC6Q96NY7 704 aa17.16■□□□□ 0.34
PDGFA-201ENST00000354513 PARD6AQ9NPB6 346 aa17.16■□□□□ 0.34
PDGFA-201ENST00000354513 TMLHEQ9NVH6 421 aa17.16■□□□□ 0.34
PDGFA-201ENST00000354513 DPP3Q9NY33 737 aa17.16■□□□□ 0.34
PDGFA-201ENST00000354513 NCDNQ9UBB6 729 aa17.16■□□□□ 0.34
PDGFA-201ENST00000354513 A0A087X0B3 334 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 VPS37CA5D8V6 355 aaPredicted RBP17.15■□□□□ 0.34
PDGFA-201ENST00000354513 CYB561D2O14569 222 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 PAX3P23760 479 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 TAF6P49848 677 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 GPR158Q5T848 1215 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 WSCD1Q658N2 575 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 STKLD1Q8NE28 680 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 RASSF8Q8NHQ8 419 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 CXorf38Q8TB03 319 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 RIN3Q8TB24 985 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 E2F7Q96AV8 911 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 HVCN1Q96D96 273 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 CHFRQ96EP1 664 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 SEPT5Q99719 369 aaPredicted RBP17.15■□□□□ 0.34
PDGFA-201ENST00000354513 PYM1Q9BRP8 204 aaKnown RBP17.15■□□□□ 0.34
PDGFA-201ENST00000354513 IER2Q9BTL4 223 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 ATXN3LQ9H3M9 355 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 GTSE1Q9NYZ3 720 aa17.15■□□□□ 0.34
PDGFA-201ENST00000354513 ATG2BQ96BY7 2078 aa17.14■□□□□ 0.33
PDGFA-201ENST00000354513 MYBPHLA2RUH7 354 aa17.14■□□□□ 0.33
PDGFA-201ENST00000354513 SPECC1L-ADORA2AF8WAN1 911 aa17.14■□□□□ 0.33
PDGFA-201ENST00000354513 K7ESF4 209 aa17.14■□□□□ 0.33
PDGFA-201ENST00000354513 HAPLN1P10915 354 aaPredicted RBP17.14■□□□□ 0.33
PDGFA-201ENST00000354513 WEE1P30291 646 aa17.14■□□□□ 0.33
PDGFA-201ENST00000354513 CTHP32929 405 aa17.14■□□□□ 0.33
PDGFA-201ENST00000354513 POU5F1Q01860 360 aaKnown RBP17.14■□□□□ 0.33
PDGFA-201ENST00000354513 RSPO4Q2I0M5 234 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms